Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq920 262 1e-67 seq1322 253 7e-65 >seq920 Length=66673 Score = 262 bits (290), Expect = 1e-67 Identities = 320/433 (74%), Gaps = 15/433 (3%) Strand=Plus/Minus Query 134 GACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTT 193 |||||| |||||| || ||||||||||||||||||| | | ||| |||||| ||| Sbjct 7221 GACGCTAGTCCTAAAACTATATCGGGGAGAACCAGCTATCTCCAGGTTCGATTGGAATTT 7162 Query 194 CACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGC 253 |||| ||| ||||| ||||||| | |||||||| | || |||||||||||||| Sbjct 7161 CACCGCTAGCCACAAGTCATCCACGGTCTTTTCAACGAACGTTGGTTCGGTCCTCCATTA 7102 Query 254 GGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGT 313 | |||| ||||||||||| ||||| |||||||| | | ||||||||| | Sbjct 7101 ACTGTTACATTAACTTCAACCTGCTCATGGCTAGATCACCTGGTTTCGGGTCTACGACCA 7042 Query 314 GCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC-CCCACACGGGTTAACC 372 ||| | ||||||||||| | ||||||||| || ||||| | | | |||||| Sbjct 7041 CATACT-AAACGCCCTATTCAGGCTCGCTTTCACTTCGGCTCCGTCTTTTCAACTTAACC 6983 Query 373 TCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACC 432 | || | || ||||||| |||||||||| ||||||||||||||||||| | Sbjct 6982 TTGC-ATGTAATCGTAACTCGCCGGCTCATTCTACAAAAGGCACGCCGTCACC-----CA 6929 Query 433 TAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCC 492 | || || |||||||| ||||| ||| |||||||||| ||||||||||||| Sbjct 6928 TTAACGG-------GCTCCGACTTGTTGTAAGCATATGGTTTCAGAAACTATTTCACTCC 6876 Query 493 CCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGA 552 || | ||||||||||||||||||||||||||||||| || | |||||||| | | Sbjct 6875 CCTCTCGGGGTACTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTAATTGGTTA 6816 Query 553 GTATTTAGGCTTA 565 |||||||| |||| Sbjct 6815 GTATTTAGCCTTA 6803 >seq1322 Length=110664 Score = 253 bits (280), Expect = 7e-65 Identities = 318/433 (73%), Gaps = 15/433 (3%) Strand=Plus/Plus Query 134 GACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTT 193 |||||| |||||| || ||||||||||||||||||| | | ||| |||||| ||| Sbjct 21603 GACGCTAGTCCTAAAACTATATCGGGGAGAACCAGCTATCTCCAGGTTCGATTGGAATTT 21662 Query 194 CACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGC 253 |||| ||| ||||| ||||||| | |||||||| | || |||||||||||||| Sbjct 21663 CACCGCTAGCCACAAGTCATCCACGGTCTTTTCAACGAACGTTGGTTCGGTCCTCCATTA 21722 Query 254 GGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGT 313 | |||| ||||||||||| ||||| |||||||| | | ||||||||| | Sbjct 21723 ACTGTTACATTAACTTCAACCTGCTCATGGCTAGATCACCTGGTTTCGGGTCTACGACCA 21782 Query 314 GCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC-CCCACACGGGTTAACC 372 ||| | ||||||||||| | ||||||||| || |||| | | | |||||| Sbjct 21783 CATACT-AAACGCCCTATTCAGGCTCGCTTTCACTTAGGCTCCGTCTTTTCAACTTAACC 21841 Query 373 TCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACC 432 | || | || ||||||| |||||||||| ||||||||||||||||||| | Sbjct 21842 TTGC-ATGTAATCGTAACTCGCCGGCTCATTCTACAAAAGGCACGCCGTCACC-----CA 21895 Query 433 TAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCC 492 | || || |||||||| ||||| ||| |||||||||| ||||||||||||| Sbjct 21896 TTAACGG-------GCTCCGACTTGTTGTAAGCATATGGTTTCAGAAACTATTTCACTCC 21948 Query 493 CCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGA 552 || | ||||||||||||||| ||||||||||||||| || | |||||||| | | Sbjct 21949 CCTCTCGGGGTACTTTTCACCATTCCCTCACGGTACTGGTTCACTATCGGTAATTGGTTA 22008 Query 553 GTATTTAGGCTTA 565 |||||||| |||| Sbjct 22009 GTATTTAGCCTTA 22021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817564084224