Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq1322 217 3e-54 seq920 217 3e-54 >seq1322 Length=110664 Score = 217 bits (240), Expect = 3e-54 Identities = 237/312 (76%), Gaps = 7/312 (2%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| ||||||| |||| ||||||||| || || ||| |||||||||| |||||| Sbjct 24071 GGCATTGCTCCATCAGGCTTTCGCCCATTGTGAAAAATTCCCTACTGCTGCCTTCCGTAG 24130 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||| ||||||||||||||||||||||||||||||||| |||||||| ||||||| || Sbjct 24131 AAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCATCCTCTCAGATCGGCTACGCAT 24190 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||| |||||| || |||| || |||||||| |||| | ||| |||||| | | Sbjct 24191 CGTTACCTTGGTAAGCCATTACCTTACCAACTAGTTAATGCGGCGCATCCCCATCAATTA 24250 Query 181 GCGA--TAAAT----CTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTA 234 |||| |||| |||| | | | ||| | | ||| |||||||||||| Sbjct 24251 GCGAAGCAAATGCTCCTTTCATTATTTATCATTGCAAATAAATAACA-TATGCGGTATTA 24309 Query 235 GCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCC 294 || |||||||||| |||||||| | || || || ||||| ||||||||||||||| Sbjct 24310 GCTGTCGTTTCCAACAGTTATTCCCCACTAAATGGTAGGTTAGATACGTGTTACTCACCC 24369 Query 295 GTCCGCCACTAA 306 || ||||||||| Sbjct 24370 GTTCGCCACTAA 24381 >seq920 Length=66673 Score = 217 bits (240), Expect = 3e-54 Identities = 237/312 (76%), Gaps = 7/312 (2%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| ||||||| |||| ||||||||| || || ||| |||||||||| |||||| Sbjct 5006 GGCATTGCTCCATCAGGCTTTCGCCCATTGTGAAAAATTCCCTACTGCTGCCTTCCGTAG 4947 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||| ||||||||||||||||||||||||||||||||| |||||||| ||||||| || Sbjct 4946 AAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCATCCTCTCAGATCGGCTACGCAT 4887 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||| |||||| || |||| || |||||||| |||| | ||| |||||| | | Sbjct 4886 CGTTACCTTGGTAAGCCATTACCTTACCAACTAGTTAATGCGGCGCATCCCCATCAATTA 4827 Query 181 GCGA--TAAAT----CTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTA 234 |||| |||| |||| | | | ||| | | ||| |||||||||||| Sbjct 4826 GCGAAGCAAATGCTCCTTTCATTATTTATCATTGCAAATAAATAACA-TATGCGGTATTA 4768 Query 235 GCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCC 294 || |||||||||| |||||||| | || || || ||||| ||||||||||||||| Sbjct 4767 GCTGTCGTTTCCAACAGTTATTCCCCACTAAATGGTAGGTTAGATACGTGTTACTCACCC 4708 Query 295 GTCCGCCACTAA 306 || ||||||||| Sbjct 4707 GTTCGCCACTAA 4696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998380271616