Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq1322 233 5e-59 seq920 233 5e-59 >seq1322 Length=110664 Score = 233 bits (258), Expect = 5e-59 Identities = 305/418 (73%), Gaps = 22/418 (5%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| || |||| |||| ||| ||| ||| | || Sbjct 21060 CGACTACGCCTTTCGGCCTCGCCTTAGGTCCTGACTAACCCTGGGTGGACGAACCTAGCC 21119 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 | |||| |||||| ||||||| |||||| |||| ||| || |||||| ||| | Sbjct 21120 CAGGAAACCTTGGTCAATCGGCATGAAGGATTCTCACCT-TCAATCGTTACTCACGCCGG 21178 Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGC-AGCTTCACCACTGACACGA 179 |||||||||| | |||||| | | || | | | | |||| | | || || Sbjct 21179 CATTCTCACTTCTAAACGCTCCACTAGTCCTTC--CGGTCTAACTTCGTCGCAGATTAGA 21236 Query 180 -CGCTCCCCTACCC--------------AACCACACAGGTTG--CCACAGCTTCGGCGGA 222 |||||||||||| || || | | | | ||| |||||||| | Sbjct 21237 ACGCTCCCCTACCGCCCACAATATATGTAAACATATATATAGACCCATAGCTTCGGTACA 21296 Query 223 TAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCAC 282 |||| |||||| |||||| || |||| |||||| | ||| |||||||| |||||||| Sbjct 21297 ATGCTTA-GCCCCGGTACATTTTCCGCGCAGAATCATTCGACTAGTGAGCTGTTACGCAC 21355 Query 283 TCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCT 342 ||||| ||||||||||||||| ||||||||||||| | ||||| ||| |||||||| | Sbjct 21356 TCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTAGCTGTCTGAACAATTCCACATCGT 21415 Query 343 TTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || ||||| || | || ||| |||||||||||||||||||||||||||||| || Sbjct 21416 TTTCCACTTAGCATTGATTTGGGGACCTTAGCTGATGATCTGGGCTGTTTCCCTCACG 21473 >seq920 Length=66673 Score = 233 bits (258), Expect = 5e-59 Identities = 305/418 (73%), Gaps = 22/418 (5%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| || |||| |||| ||| ||| ||| | || Sbjct 7764 CGACTACGCCTTTCGGCCTCGCCTTAGGTCCTGACTAACCCTGGGTGGACGAACCTAGCC 7705 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 | |||| |||||| ||||||| |||||| |||| ||| || |||||| ||| | Sbjct 7704 CAGGAAACCTTGGTCAATCGGCATGAAGGATTCTCACCT-TCAATCGTTACTCACGCCGG 7646 Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGC-AGCTTCACCACTGACACGA 179 |||||||||| | |||||| | | || | | | | |||| | | || || Sbjct 7645 CATTCTCACTTCTAAACGCTCCACTAGTCCTTC--CGGTCTAACTTCGTCGCAGATTAGA 7588 Query 180 -CGCTCCCCTACCC--------------AACCACACAGGTTG--CCACAGCTTCGGCGGA 222 |||||||||||| || || | | | | ||| |||||||| | Sbjct 7587 ACGCTCCCCTACCGCCCACAATATATGTAAACATATATATAGACCCATAGCTTCGGTACA 7528 Query 223 TAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCAC 282 |||| |||||| |||||| || |||| |||||| | ||| |||||||| |||||||| Sbjct 7527 ATGCTTA-GCCCCGGTACATTTTCCGCGCAGAATCATTCGACTAGTGAGCTGTTACGCAC 7469 Query 283 TCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCT 342 ||||| ||||||||||||||| ||||||||||||| | ||||| ||| |||||||| | Sbjct 7468 TCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTAGCTGTCTGAACAATTCCACATCGT 7409 Query 343 TTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || ||||| || | || ||| |||||||||||||||||||||||||||||| || Sbjct 7408 TTTCCACTTAGCATTGATTTGGGGACCTTAGCTGATGATCTGGGCTGTTTCCCTCACG 7351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177576730624