Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq920 131 1e-28 seq1322 127 2e-27 >seq920 Length=66673 Score = 131 bits (144), Expect = 1e-28 Identities = 119/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| ||||||||||| || ||||| || |||| ||| ||||||| Sbjct 5916 TCGAGTTGCAGACTTCAATCCGGACTGAGACTGACTTTTTGAGATTTGCTTGACCTCGCG 5857 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | || ||| | || ||||| |||||||| ||||||| ||||| |||||||| || Sbjct 5856 GTTTAGCGACTCTTTGTATCAGCCATTGTAGCACGTGTGTAGCCCAGGTCATAAGGGGCA 5797 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC 150 ||| || |||||||| |||||||||||||| Sbjct 5796 TGATGATTTGACGTCGTCCCCACCTTCCTC 5767 >seq1322 Length=110664 Score = 127 bits (140), Expect = 2e-27 Identities = 118/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| ||||||| ||| || ||||| || |||| ||| ||||||| Sbjct 23161 TCGAGTTGCAGACTTCAATCCGAACTGAGACTGACTTTTTGAGATTTGCTTGACCTCGCG 23220 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | || ||| | || ||||| |||||||| ||||||| ||||| |||||||| || Sbjct 23221 GTTTAGCGACTCTTTGTATCAGCCATTGTAGCACGTGTGTAGCCCAGGTCATAAGGGGCA 23280 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC 150 ||| || |||||||| |||||||||||||| Sbjct 23281 TGATGATTTGACGTCGTCCCCACCTTCCTC 23310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415992036720