Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq1322 273 4e-71 seq920 273 4e-71 >seq1322 Length=110664 Score = 273 bits (302), Expect = 4e-71 Identities = 228/278 (82%), Gaps = 1/278 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| ||| || ||||||| | | |||| | ||||||||||||||||||| Sbjct 23697 CCCACGCTTTCGTGCCACAACGTCAGTAATAGGCCAGTTAGCCGCCTTCGCCACTGGTGT 23756 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| | |||||||||||||| |||||||||||| | |||||| | ||||||| || Sbjct 23757 TCCTTCATATATCTACGCATTCCACCGCTACACATGAAATTCCACTAACCTCTCCTATAC 23816 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || || |||||| || || || || |||||||||| || ||| || || |||| Sbjct 23817 TCTAGTAATGTAGTTTCCAAGGC-GGTTAGCGGTTGAGCCCCTAAATTTAACCTCAGACT 23875 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 ||| ||| |||| | | |||||| ||||||||||||||||||||||||||||||| | Sbjct 23876 TGCAAAACCGTCTACGCACGCTTTACGCCCAATAAATCCGGATAACGCTTGCCACCTATG 23935 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||||||||||||||||||||| |||||||||||||||| Sbjct 23936 TATTACCGCGGCTGCTGGCACATAGTTAGCCGTGGCTT 23973 >seq920 Length=66673 Score = 273 bits (302), Expect = 4e-71 Identities = 228/278 (82%), Gaps = 1/278 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| ||| || ||||||| | | |||| | ||||||||||||||||||| Sbjct 5380 CCCACGCTTTCGTGCCACAACGTCAGTAATAGGCCAGTTAGCCGCCTTCGCCACTGGTGT 5321 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| | |||||||||||||| |||||||||||| | |||||| | ||||||| || Sbjct 5320 TCCTTCATATATCTACGCATTCCACCGCTACACATGAAATTCCACTAACCTCTCCTATAC 5261 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || || |||||| || || || || |||||||||| || ||| || || |||| Sbjct 5260 TCTAGTAATGTAGTTTCCAAGGC-GGTTAGCGGTTGAGCCCCTAAATTTAACCTCAGACT 5202 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 ||| ||| |||| | | |||||| ||||||||||||||||||||||||||||||| | Sbjct 5201 TGCAAAACCGTCTACGCACGCTTTACGCCCAATAAATCCGGATAACGCTTGCCACCTATG 5142 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||||||||||||||||||||| |||||||||||||||| Sbjct 5141 TATTACCGCGGCTGCTGGCACATAGTTAGCCGTGGCTT 5104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828784134696