Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq737 120 3e-25 seq378 96.9 4e-18 >seq737 Length=19741 Score = 120 bits (132), Expect = 3e-25 Identities = 141/185 (76%), Gaps = 12/185 (6%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGG---CCTTTGCTCGAATACATTAC 66 || ||||||||||| ||||||||| | | |||||||| |||| || |||||| | | Sbjct 7424 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTACCTTCGCCTGAATAC--TGC 7367 Query 67 ---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC-- 121 ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | || Sbjct 7366 GTGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCCGA 7309 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| ||| || ||||| | ||||| || | |||||||||||| Sbjct 7308 GGTAATGATTAATAGGGACAGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 7249 Query 182 TGGAT 186 ||||| Sbjct 7248 TGGAT 7244 >seq378 Length=24228 Score = 96.9 bits (106), Expect = 4e-18 Identities = 128/170 (75%), Gaps = 12/170 (7%) Strand=Plus/Plus Query 25 AAATTAGAGCGTTCAAAGCAGGC--CTTTGCTC-GAATACATTAC---CATGGAATAATA 78 ||||||||| | | ||||||||| |||| | |||||| | | ||||||||||| Sbjct 3831 AAATTAGAGTGCTTAAAGCAGGCTACTTTCACCTGAATAC--TGCGTGCATGGAATAATG 3888 Query 79 GAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC--GTAATGATAAATAC 136 ||||||||| | |||||||||||||| ||||| | ||| | || |||||||| |||| Sbjct 3889 GAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAG 3946 Query 137 GGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 ||| || ||||| | ||||| || | ||||||||||||||||| Sbjct 3947 GGACAGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGAT 3996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511990199040