Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq1322 78.8 9e-13 seq920 78.8 9e-13 >seq1322 Length=110664 Score = 78.8 bits (86), Expect = 9e-13 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| |||| ||||| ||| ||| ||||||||||| | || |||||| |||| Sbjct 20029 GTTGAGCGACGGCCTTTCCACACAGCACCGCCGGATCACTAAGCCCAACTTTCGTTCCTG 20088 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 ||||| || |||||||||||||| ||| | || |||| || Sbjct 20089 CTCGACTTGTATGTCTCGCAGTCAAGCACCCTTTTACCTTTGCGCT 20134 >seq920 Length=66673 Score = 78.8 bits (86), Expect = 9e-13 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| |||| ||||| ||| ||| ||||||||||| | || |||||| |||| Sbjct 8795 GTTGAGCGACGGCCTTTCCACACAGCACCGCCGGATCACTAAGCCCAACTTTCGTTCCTG 8736 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 ||||| || |||||||||||||| ||| | || |||| || Sbjct 8735 CTCGACTTGTATGTCTCGCAGTCAAGCACCCTTTTACCTTTGCGCT 8690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473590934112