Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq1322 300 2e-79 seq920 300 2e-79 >seq1322 Length=110664 Score = 300 bits (332), Expect = 2e-79 Identities = 226/266 (85%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 10 CTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCAC 69 ||||| |||||||||| |||||| ||||| | | || || ||||| ||||||| ||| Sbjct 19690 CTTCGCGCTTAGATGCTTTCAGCGCTTATTCATGCCCTACATAGCTACCCAGCTGTGCCA 19749 Query 70 TTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACA 129 |||| |||||||||||||||||||| |||||| ||||||||||||||||| | ||| Sbjct 19750 CTGGCGTGACAACTGGTGCACCAGAGGTAGGTCCATTCCGGTCCTCTCGTACTAGGAACA 19809 Query 130 GCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCT 189 ||| |||||||||| | |||||||||| |||||||||| ||||||||| ||||||||| Sbjct 19810 GCTTTCCTCAAATTTCTTGCGCCCACGACAGATAGGGACCAAACTGTCTCACGACGTTCT 19869 Query 190 GAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAG 249 ||||||||||||||| || ||||||||||||||||||||||||||||| | | ||| || Sbjct 19870 GAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAAGCGACTACAC 19929 Query 250 CCCCAGGATGAGACGAGCCGACATCG 275 | |||||||| || |||||||||||| Sbjct 19930 CTCCAGGATGCGATGAGCCGACATCG 19955 >seq920 Length=66673 Score = 300 bits (332), Expect = 2e-79 Identities = 226/266 (85%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 10 CTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCAC 69 ||||| |||||||||| |||||| ||||| | | || || ||||| ||||||| ||| Sbjct 9134 CTTCGCGCTTAGATGCTTTCAGCGCTTATTCATGCCCTACATAGCTACCCAGCTGTGCCA 9075 Query 70 TTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACA 129 |||| |||||||||||||||||||| |||||| ||||||||||||||||| | ||| Sbjct 9074 CTGGCGTGACAACTGGTGCACCAGAGGTAGGTCCATTCCGGTCCTCTCGTACTAGGAACA 9015 Query 130 GCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCT 189 ||| |||||||||| | |||||||||| |||||||||| ||||||||| ||||||||| Sbjct 9014 GCTTTCCTCAAATTTCTTGCGCCCACGACAGATAGGGACCAAACTGTCTCACGACGTTCT 8955 Query 190 GAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAG 249 ||||||||||||||| || ||||||||||||||||||||||||||||| | | ||| || Sbjct 8954 GAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAAGCGACTACAC 8895 Query 250 CCCCAGGATGAGACGAGCCGACATCG 275 | |||||||| || |||||||||||| Sbjct 8894 CTCCAGGATGCGATGAGCCGACATCG 8869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780785053536