Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq737 223 7e-56 seq378 223 7e-56 seq561 196 9e-48 seq488 147 4e-33 seq476 100 5e-19 >seq737 Length=19741 Score = 223 bits (246), Expect = 7e-56 Identities = 208/258 (81%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||||| | ||||| || | ||||| ||||| |||||||||| Sbjct 6494 CTTCTTAGAGGGACAGGCGGCTTCTAGCCGCACGA-GATTGAG-CAATAGCAGGTCTGTG 6437 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||| ||||| || || || || | || Sbjct 6436 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTATACTGAAGGAATCAGCGTGT-CTTCC 6378 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 | |||||| |||| | |||||| | | || ||| ||||||| ||||| | | ||| Sbjct 6377 C--TGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGGATTGGGGCTTG 6320 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | || ||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 6319 CAATTATTCCCCATGAAGGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 6260 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 6259 ACGTCCCTGCCCTTTGTA 6242 Score = 104 bits (114), Expect = 4e-20 Identities = 78/92 (85%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 237 GGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATC 296 ||||| | | ||||||||||| | | | |||||||||| || |||||||| | ||||| Sbjct 7180 GGGATTGGGGCTTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGCGTGAGTCATA 7121 Query 297 AGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| |||||||||||||||||||||||||||| Sbjct 7120 AGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 7089 >seq378 Length=24228 Score = 223 bits (246), Expect = 7e-56 Identities = 208/258 (81%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 4732 CTTCTTAGAGGGACAGGCGGCTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 4789 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| || || || || | || Sbjct 4790 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGT-CTTCC 4848 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 | |||||| |||| | |||||| | | || ||| ||||||| ||||| | | ||| Sbjct 4849 C--TGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGGATTGGGGCTTG 4906 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | ||| |||||| || |||||||||| || || ||| ||||||||| Sbjct 4907 CAATTATTCCCCATGAACCAGGAATTCCCAGTAAGCGCGAGTGATAAGCTCGCGTTGATA 4966 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 4967 ACGTCCCTGCCCTTTGTA 4984 >seq561 Length=33869 Score = 196 bits (216), Expect = 9e-48 Identities = 166/202 (82%), Gaps = 3/202 (1%) Strand=Plus/Minus Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC 186 |||||||||||||||||||||||||||||||||||||||||||| || || || || | Sbjct 18439 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTGT-C 18381 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGC 246 || | |||||| |||| | |||||| | | || ||| ||||||| ||||| | | Sbjct 18380 TTCCC--TGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTCGTGCTAGGGATTGGGG 18323 Query 247 ATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTT 306 ||||||||||| | | | |||||||||| || |||||||||| ||||| ||| |||||| Sbjct 18322 CTTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTT 18263 Query 307 GATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||| Sbjct 18262 GATTACGTCCCTGCCCTTTGTA 18241 Score = 120 bits (132), Expect = 6e-25 Identities = 89/100 (89%), Gaps = 3/100 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 18567 CTTCTTAGAGGGACAGGCGGCTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 18510 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 |||||||||||||||||||||||||||||||||||||||| Sbjct 18509 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 18470 >seq488 Length=40361 Score = 147 bits (162), Expect = 4e-33 Identities = 149/188 (79%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| ||||| | ||||| || | ||||| |||||||||||||||| Sbjct 34588 CTTCTTAGAGGGACAGGCGGCTTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 34645 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||||||||||||||| || || || | || | Sbjct 34646 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTG-TCTT-- 34702 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || |||||| |||| | |||||| | | || ||| ||||||| |||| | | ||| Sbjct 34703 CCCTGGCCGAAAGGCCCGGGTAACCCGCTGAACCTCCTTCGTGCTATGGATTGGGGCTTG 34762 Query 251 CAATTATT 258 |||||||| Sbjct 34763 CAATTATT 34770 >seq476 Length=7004 Score = 100 bits (110), Expect = 5e-19 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 ||||||| ||||| | | ||||||||||| | | | || ||||||| | ||||||||| Sbjct 2 TCGTGCTAGGGATTGGGGCTTGCAATTATTCCCCATGAATGAGGAATTTCCAGTAAGCGC 61 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||| ||| ||||||||||||| |||||||||||||| Sbjct 62 GAGTCATAAGCTCGCGTTGATTACG-CCCTGCCCTTTGTA 100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947181283328