Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq1322 134 3e-29 seq920 134 3e-29 >seq1322 Length=110664 Score = 134 bits (148), Expect = 3e-29 Identities = 184/252 (73%), Gaps = 9/252 (4%) Strand=Plus/Minus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 |||||||||||||||| | || |||||||||||| | | ||||||||||| || Sbjct 22476 ATGGTGGATGCCTTGGAATTGGAAGACGATGAAGGACGCGATTACCTGCGATAAGCTTCG 22417 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC-GGCCCTTT- 125 ||||| | ||| | |||||||||| |||| ||||||||||||||||| |||| Sbjct 22416 GGGAG-CTGGAAATAAGCTTTGATCCGGAGATGTCCGAATGGGGAAACCCACTATCTTTA 22358 Query 126 ---GGGT--CATTGCATGCTGAATACATAGGTATGCAAAGCGA-ACGCGGCGAACTGAAA 179 | | | || | ||||| ||||| | |||| || || || | ||| ||||| Sbjct 22357 ATCAGATAGTACTGTACAATGAATTCATAGTTGTGCAGAGTGATACCTAGAGAATTGAAA 22298 Query 180 CATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 ||||| |||| || ||||||||||| | | | ||||||| ||||| ||||||||||| Sbjct 22297 CATCTTAGTACCTAGAGGAAAAGAAAGCGAATGTGATTCCCTTAGTAGCGGCGAGCGAAA 22238 Query 240 TGGGATGAGCCT 251 |||| ||||| Sbjct 22237 AGGGAGCAGCCT 22226 >seq920 Length=66673 Score = 134 bits (148), Expect = 3e-29 Identities = 184/252 (73%), Gaps = 9/252 (4%) Strand=Plus/Plus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 |||||||||||||||| | || |||||||||||| | | ||||||||||| || Sbjct 6348 ATGGTGGATGCCTTGGAATTGGAAGACGATGAAGGACGCGATTACCTGCGATAAGCTTCG 6407 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC-GGCCCTTT- 125 ||||| | ||| | |||||||||| |||| ||||||||||||||||| |||| Sbjct 6408 GGGAG-CTGGAAATAAGCTTTGATCCGGAGATGTCCGAATGGGGAAACCCACTATCTTTA 6466 Query 126 ---GGGT--CATTGCATGCTGAATACATAGGTATGCAAAGCGA-ACGCGGCGAACTGAAA 179 | | | || | ||||| ||||| | |||| || || || | ||| ||||| Sbjct 6467 ATCAGATAGTACTGTACAATGAATTCATAGTTGTGCAGAGTGATACCTAGAGAATTGAAA 6526 Query 180 CATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 ||||| |||| || ||||||||||| | | | ||||||| ||||| ||||||||||| Sbjct 6527 CATCTTAGTACCTAGAGGAAAAGAAAGCGAATGTGATTCCCTTAGTAGCGGCGAGCGAAA 6586 Query 240 TGGGATGAGCCT 251 |||| ||||| Sbjct 6587 AGGGAGCAGCCT 6598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918381852416