Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1951 307 3e-81 seq673 210 7e-52 seq1313 206 9e-51 seq561 174 5e-41 seq806 165 3e-38 seq737 161 3e-37 seq476 156 1e-35 seq505 136 1e-29 seq146 136 1e-29 seq315 132 2e-28 seq940 125 2e-26 seq435 111 5e-22 seq1380 93.3 1e-16 seq1885 89.7 2e-15 seq1935 80.6 9e-13 >seq1951 Length=10653 Score = 307 bits (340), Expect = 3e-81 Identities = 173/175 (99%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5379 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 5438 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 5439 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTT 5498 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 5499 GAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 5553 Score = 84.2 bits (92), Expect = 7e-14 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 10605 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAAT 10653 >seq673 Length=46222 Score = 210 bits (232), Expect = 7e-52 Identities = 168/201 (84%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA 233 ||||| | | || |||||||| ||||||| | ||||||||||||||| ||| || Sbjct 26140 TCCGCCTTACCGAGTAAGTAAAGAAACGATGAAAGTAGTGGTATTTCACCGGCGACGTTT 26081 Query 234 CGG-CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 | ||||||||||| |||||||||||| ||| | ||| | | |||||||||||||| Sbjct 26080 CCATCTCCCACTTATGCTACACCTCTCATGTCTCCTTACAGTGCCAGACTAGAGTCAAGC 26021 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 |||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| Sbjct 26020 TCAACAGGGTCTTCTTTCCCCGCTAATTTTTCCAAGCCCGTTCCCTTGGCAGTGGTTTCG 25961 Query 353 CTAGATAGTAGATAGGGACAG 373 ||||||||||||||||||||| Sbjct 25960 CTAGATAGTAGATAGGGACAG 25940 Score = 145 bits (160), Expect = 2e-32 Identities = 89/95 (94%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct 26519 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTAATTTTTCCAAGCCCGTTCCCT 26460 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAG 373 | || |||||||||||||||||||||||||||||| Sbjct 26459 TTGCAGTGGTTTCGCTAGATAGTAGATAGGGACAG 26425 Score = 78.8 bits (86), Expect = 3e-12 Identities = 64/78 (82%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 49 TAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACA 108 ||||||||||||||||| ||| |||||||| ||||||||| ||||||||| |||| | Sbjct 26325 TAGGACACCTGCGTTATTCTTTGACAGATGTACCGCCCCAGTCAAACTCCCAGCCTGGAA 26266 Query 109 ATGTCATCAACCCGGATC 126 |||| || | |||||| Sbjct 26265 GTGTCCTCGAATCGGATC 26248 >seq1313 Length=6372 Score = 206 bits (228), Expect = 9e-51 Identities = 167/201 (83%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA 233 ||||| | | || |||||||| ||||||| | ||||||||||||||| ||| || Sbjct 5162 TCCGCCTTACCGAGTAAGTAAAGAAACGATGAAAGTAGTGGTATTTCACCGGCGACGTTT 5103 Query 234 CGG-CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 | ||||||||||| |||||||||||| ||| | ||| | | |||||||||||||| Sbjct 5102 CCATCTCCCACTTATGCTACACCTCTCATGTCTCCTTACAGTGCCAGACTAGAGTCAAGC 5043 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 |||||||||||||||||||||||| ||| ||||||||||||||||| | ||||||||| Sbjct 5042 TCAACAGGGTCTTCTTTCCCCGCTAATTTTTCCAAGCCCGTTCCCTTGCCAGTGGTTTCG 4983 Query 353 CTAGATAGTAGATAGGGACAG 373 ||||||||||||||||||||| Sbjct 4982 CTAGATAGTAGATAGGGACAG 4962 Score = 129 bits (142), Expect = 2e-27 Identities = 73/74 (99%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2962 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCAGTAATTAGATGAC 2903 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 2902 GAGGCATTTGGCTA 2889 Score = 109 bits (120), Expect = 2e-21 Identities = 96/120 (80%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| ||||||| ||| |||| |||||||||||||||||||| Sbjct 5389 CTTTTGCTCTACGCGAGGTTTCTGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 5330 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| ||||||||| |||| | |||| || | |||||| Sbjct 5329 CTTTGACAGATGTACCGCCCCAGTCAAACTCCCAGCCTGGAAGTGTCCTCGAATCGGATC 5270 >seq561 Length=33869 Score = 174 bits (192), Expect = 5e-41 Identities = 99/101 (98%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 14078 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGT 14137 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||| Sbjct 14138 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 14178 >seq806 Length=11904 Score = 165 bits (182), Expect = 3e-38 Identities = 99/104 (95%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489 || ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct 10534 CTCCCTTAAGAGAGTCATAGTTACTCCCGCTGTTTACCCGCGCTTGCTTGAATTTCTTCA 10593 Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 | ||||||||||||||||| |||||||||||||||||||||||| Sbjct 10594 CGTTGACATTCAGAGCACTCGGCAGAAATCACATTGCGTCAACA 10637 Score = 77.0 bits (84), Expect = 1e-11 Identities = 47/50 (94%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 324 CCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAG 373 ||||||||||||||||||| |||||||||||||||||||||||| || || Sbjct 6 CCAAGCCCGTTCCCTTGGCAGTGGTTTCGCTAGATAGTAGATAGAGAGAG 55 >seq737 Length=19741 Score = 161 bits (178), Expect = 3e-37 Identities = 98/104 (94%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| | Sbjct 1075 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCAAGCTTGCTTGAATTTCTTCACGT 1134 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536 |||||||||||||||||| |||||||||||||||||||||| || Sbjct 1135 TGACATTCAGAGCACTGGACAGAAATCACATTGCGTCAACACCA 1178 >seq476 Length=7004 Score = 156 bits (172), Expect = 1e-35 Identities = 94/99 (95%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| ||| Sbjct 4310 TTAAGAGAGTCATAGTTACACCCGCCGTTTATCCGCGCTTACTTGAATTTCTTCACGTTG 4251 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||| Sbjct 4250 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 4212 >seq505 Length=5637 Score = 136 bits (150), Expect = 1e-29 Identities = 75/75 (100%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 622 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 563 Query 419 GAGGCATTTGGCTAC 433 ||||||||||||||| Sbjct 562 GAGGCATTTGGCTAC 548 >seq146 Length=31772 Score = 136 bits (150), Expect = 1e-29 Identities = 75/75 (100%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 30179 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 30120 Query 419 GAGGCATTTGGCTAC 433 ||||||||||||||| Sbjct 30119 GAGGCATTTGGCTAC 30105 >seq315 Length=31190 Score = 132 bits (146), Expect = 2e-28 Identities = 73/73 (100%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 29684 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 29743 Query 419 GAGGCATTTGGCT 431 ||||||||||||| Sbjct 29744 GAGGCATTTGGCT 29756 >seq940 Length=28123 Score = 125 bits (138), Expect = 2e-26 Identities = 72/74 (97%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 22385 AGTAAATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAAATGAC 22444 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 22445 GAGGCATTTGGCTA 22458 >seq435 Length=10380 Score = 111 bits (122), Expect = 5e-22 Identities = 66/69 (96%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 9334 AGTAGTTAGGTACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAATTAGATGAC 9393 Query 419 GAGGCATTT 427 ||||||||| Sbjct 9394 GAGGCATTT 9402 >seq1380 Length=1177 Score = 93.3 bits (102), Expect = 1e-16 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 ||||||||||||||| | | ||||||||||||||||||| ||||||| |||||||||| Sbjct 1177 TCTTCTTTCCCCGCTAACTTTTCCAAGCCCGTTCCCTTGGCAGTGGTTTTGCTAGATAGT 1118 Query 362 AGATAGGGACA 372 | ||||||||| Sbjct 1117 AAATAGGGACA 1107 >seq1885 Length=4387 Score = 89.7 bits (98), Expect = 2e-15 Identities = 49/49 (100%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 385 TTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 433 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4387 TTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 4339 Score = 82.4 bits (90), Expect = 2e-13 Identities = 47/48 (98%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGA 480 ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 48 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGA 1 >seq1935 Length=1345 Score = 80.6 bits (88), Expect = 9e-13 Identities = 47/49 (96%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 |||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 1297 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTCGCTTGAAT 1345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635167688448