Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1322 381 2e-103 seq920 381 2e-103 >seq1322 Length=110664 Score = 381 bits (422), Expect = 2e-103 Identities = 424/565 (75%), Gaps = 12/565 (2%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||||||||| ||||||||||||||| ||||| | | || | ||| || ||||| || Sbjct 20090 TCGACTTGTATGTCTCGCAGTCAAGCACCCTTTTACCTTTGCGCTCTACATATGATTTCC 20149 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | || |||||| ||||||||||||||||||||| |||| ||||| | |||||||||| Sbjct 20150 ATTCATATTGAGGGTACCTTTGGGCGCCTCCGTTACTTTTTAGGAGG-CGACCGCCCCAG 20208 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | |||||||||||||| |||||||| | |||||| |||| | | |||||| | || Sbjct 20209 TCAAACTACCCACCAGACACTGTCCTTAGACCAGATTATGGTCTCAAGTTAGAATTTCAA 20268 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 || | || ||||||| ||| ||||||| | |||||||| | |||| || Sbjct 20269 TATAGCAAGGGTGGTATCCCAATGGTGACTCCATGCCTACTAGCGTCTGCATATCAACGT 20328 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC- 299 ||||||||||| || |||||| |||| || ||||| |||| | |||| ||| ||| Sbjct 20329 CTCCCACCTATGCTGTACAAACTACACCAAAATTCAATATCAAGTTGTAGTAAAGCTCCA 20388 Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 |||||||||| |||| |||| | ||| ||||||| || ||||| ||||||||| Sbjct 20389 CGGGGTCTTTCCGTCTAATCGCGGGTAACCTGCATCTTCACAGGTACTAAGATTTCACCG 20448 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 | || | | |||||||| | |||||||||| ||||||| |||| ||||||||| Sbjct 20449 AGTCTATAGCCGAGACAGCGTCCGGATCGTTACGCCTTTCGTGCGGGTCAGAACTTACCT 20508 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct 20509 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACTGGGGCTTC 20568 Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539 | || || || | || ||| || | || ||||||||||||||| | Sbjct 20569 AGTTCAAAGCTTCGCTTAC----------GCTAACAAATCTCTTTAACCTTCCAGCACTG 20618 Query 540 GGCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||| || ||||| ||| Sbjct 20619 GGCAGGCGTCACCCCCTATACATCG 20643 >seq920 Length=66673 Score = 381 bits (422), Expect = 2e-103 Identities = 424/565 (75%), Gaps = 12/565 (2%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||||||||| ||||||||||||||| ||||| | | || | ||| || ||||| || Sbjct 8734 TCGACTTGTATGTCTCGCAGTCAAGCACCCTTTTACCTTTGCGCTCTACATATGATTTCC 8675 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 | || |||||| ||||||||||||||||||||| |||| ||||| | |||||||||| Sbjct 8674 ATTCATATTGAGGGTACCTTTGGGCGCCTCCGTTACTTTTTAGGAGG-CGACCGCCCCAG 8616 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | |||||||||||||| |||||||| | |||||| |||| | | |||||| | || Sbjct 8615 TCAAACTACCCACCAGACACTGTCCTTAGACCAGATTATGGTCTCAAGTTAGAATTTCAA 8556 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 || | || ||||||| ||| ||||||| | |||||||| | |||| || Sbjct 8555 TATAGCAAGGGTGGTATCCCAATGGTGACTCCATGCCTACTAGCGTCTGCATATCAACGT 8496 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC- 299 ||||||||||| || |||||| |||| || ||||| |||| | |||| ||| ||| Sbjct 8495 CTCCCACCTATGCTGTACAAACTACACCAAAATTCAATATCAAGTTGTAGTAAAGCTCCA 8436 Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 |||||||||| |||| |||| | ||| ||||||| || ||||| ||||||||| Sbjct 8435 CGGGGTCTTTCCGTCTAATCGCGGGTAACCTGCATCTTCACAGGTACTAAGATTTCACCG 8376 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 | || | | |||||||| | |||||||||| ||||||| |||| ||||||||| Sbjct 8375 AGTCTATAGCCGAGACAGCGTCCGGATCGTTACGCCTTTCGTGCGGGTCAGAACTTACCT 8316 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct 8315 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACTGGGGCTTC 8256 Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539 | || || || | || ||| || | || ||||||||||||||| | Sbjct 8255 AGTTCAAAGCTTCGCTTAC----------GCTAACAAATCTCTTTAACCTTCCAGCACTG 8206 Query 540 GGCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||| || ||||| ||| Sbjct 8205 GGCAGGCGTCACCCCCTATACATCG 8181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702366360576