Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq737 432 1e-118 seq378 396 8e-108 seq488 98.7 3e-18 >seq737 Length=19741 Score = 432 bits (478), Expect = 1e-118 Identities = 418/532 (79%), Gaps = 30/532 (6%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | || | | ||| | ||||| ||||| | ||||||||| Sbjct 7690 GTACTCATTCCGATTACGGGGCCTCGGATGAGTCTCGTATCGTTATTTTTCGTCACTACC 7749 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7750 TACCCGTGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 7809 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 7810 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCATGGT 7869 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||| |||||||| |||||| ||||||| || | ||||||| Sbjct 7870 AGGCGCAGAACCTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGGT 7929 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGG--AGCCCCGAAGGG-- 293 | || || |||||| | |||||||| || ||||||||| | | | | || Sbjct 7930 ACGAGACCGTGCGATCAGCACAAAGTTATTCAGAGTCACCAAGGCAAACGGTGGACGGGA 7989 Query 294 ------------CGTTGGTTTTTTATCTAATAA----ATACACCCCTTCCGAAGTCGG-- 335 || | | |||| ||||||||| || | ||| || ||||| Sbjct 7990 CGAACCCGCCACCGATTGGTTTTGATCTAATAAAAGCATTCCTCCCATCTCTGGTCGGAA 8049 Query 336 GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACT 392 | || |||||||||||||||||||||||||| |||||||| ||| || ||||| Sbjct 8050 CTCTGTTTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGT-GGGTACG 8108 Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTA 452 ||| || ||| ||||||||||||||||||||||||| ||||||| || | | |||| Sbjct 8109 ATCTAAGGAACCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTA-ATTTGGCTTG 8167 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8168 CACTGAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 8219 >seq378 Length=24228 Score = 396 bits (438), Expect = 8e-108 Identities = 410/532 (77%), Gaps = 30/532 (6%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | || | ||| || |||| ||||| | |||| |||| Sbjct 3481 GTACTCATTCCGATTACGGGGCCTCGGGTGAGTCCCGTATTGTTATTTTTCGTCAATACC 3422 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| || | |||||||||||| |||||||||||| |||||||||||||| Sbjct 3421 TCCCCGTGCCGGGAGTGAGCAATTTGCGCGCCCGCTGCCTTCCTTAGATGTGGTAGCCGT 3362 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 3361 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCATGGT 3302 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||| |||||||| |||||| ||||||| || | ||||||| Sbjct 3301 AGGCGCAGAACCTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGGT 3242 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAAGG--AGCCCCGAAGGG-- 293 | || || |||||| | |||||||| || ||||||||| | | | | || Sbjct 3241 ACGAGACCGTGCGATCAGCACAAAGTTATTCAGAGTCACCAAGGCAAACGGTGGACGGGA 3182 Query 294 ------------CGTTGGTTTTTTATCTAATAA----ATACACCCCTTCCGAAGTCGG-- 335 || | | |||| ||||||||| || | ||| || ||||| Sbjct 3181 CGAACCCGCCACCGATTGGTTTTGATCTAATAAAAGCATTCCTCCCATCTCTGGTCGGAA 3122 Query 336 GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACT 392 | || |||||||||||||||||||||||||| |||||||| ||| || ||||| Sbjct 3121 CTCTGTTTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGT-GGGTACG 3063 Query 393 ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTA 452 ||| || ||| ||||||||||||||||||||||||| ||||||| || | | |||| Sbjct 3062 ATCTAAGGAACCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTA-ATTTGGCTTG 3004 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 3003 CCCTGAGACATGCATGGCTTAATCTTTGAGACAAGCATACGACTACTGGCAG 2952 Score = 170 bits (188), Expect = 6e-40 Identities = 135/158 (85%), Gaps = 3/158 (2%) Strand=Plus/Minus Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTA-GTAAGG-TACTATCAAATAAACGAT 406 ||||||||||||||||||||| |||||||| ||| || || ||| ||| || ||| || Sbjct 2237 TATTAGCTCTAGAATTACCACAGTTATCCAAGTAAGTGTGGGTACGATCTAAGGAACCAT 2178 Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCA 466 ||||||||||||| ||||||||| ||||||| || | | |||| || ||||||||| Sbjct 2177 AACTGATTTAATGTGCCATTCGCGGTTTCACCTTA-ATTTGGCTTGCCCTGAGACATGCA 2119 Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||| Sbjct 2118 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 2081 >seq488 Length=40361 Score = 98.7 bits (108), Expect = 3e-18 Identities = 73/84 (87%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||| ||||||| || | | |||| || ||||||||||||||||||||||| Sbjct 33975 GCCATTCGCGGTTTCACCTTA-ATTTGGCTTGCCCTGAGACATGCATGGCTTAATCTTTG 33917 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 33916 AGACAAGCATATGACTACTGGCAG 33893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510370154496