Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq211 178 1e-39 >seq211 Length=255845 Score = 178 bits (196), Expect = 1e-39 Identities = 311/442 (70%), Gaps = 18/442 (4%) Strand=Plus/Plus Query 61186 GAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAAT 61245 |||| ||||| || ||||| |||||||| ||||| || || || ||||| |||||| Sbjct 251792 GAACGTCATTTTATATCCCATGTATTGGCGTTTTTTGCAGCATCAGATGGTATTGTCAAT 251851 Query 61246 GAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTAC 61305 |||||| || | ||||| ||| || || || ||||| |||| || || || ||||| Sbjct 251852 GAGAATCTAGTAGAACGGTTCAGTCAAGAAGTCCAAGTAACGGAAGCACGGTGCTTCTAT 251911 Query 61306 GGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACG 61365 || || || || || || || ||||| ||||| || ||||| | || || | || Sbjct 251912 GGTTTTCAAATAGCAATTGAAAATGTACACTCAGAAATGTATTCCCTCCTTATAAACACA 251971 Query 61366 TACATCAGGGAGCGGGCGGAACGTGAACGAT----TGTTCAATGCCATCGAG-ACGATAC 61420 | |||||| | || ||| | || ||| | ||||||||||||||| | | | Sbjct 251972 TTCATCAGTAA---TGCCGAA-GAGAGGGATTTTCTCTTCAATGCCATCGAGAATCTTCC 252027 Query 61421 CGGCGGTG--AAGCGGAAAGCGGATTGGGCCTTCAATTGGATCAC-CAGTACAACGGCTA 61477 | ||| || || ||||| |||||||||| |||||||| | || || || || | Sbjct 252028 CTGCGTTGCTAA---AAAAGCCAATTGGGCCTTAAATTGGATTTCGCATGAC-ACAGCAA 252083 Query 61478 CATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGT 61537 | |||| ||||| || | || || || | ||| || || | || |||||||| | || Sbjct 252084 CTTTTGCAGAACGTGTGATTGCGTTCGCAGCGGTAGAAGGAATCTTCTTCAGTGG-TAGT 252142 Query 61538 TT-GCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAAT 61596 || || || ||||||||| ||||||||||||| | ||||| || || || |||||||| Sbjct 252143 TTCGCTGCTATCTTTTGGCTGAAGAAACGTGGTATCATGCCTGGACTTACATTCAGCAAC 252202 Query 61597 GAGTTGATATCACGCGACGAGG 61618 || || || || | || |||| Sbjct 252203 GAATTAATTTCCAGAGATGAGG 252224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397558425568640