Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephus_20cinctus_20[refseq_20GCF_5F000341935.1_202014-07-09] 1,976 sequences; 162,245,578 total letters Query= NC_033778.1 Length=111453 Score E Sequences producing significant alignments: (Bits) Value seq675 104 2e-17 >seq675 Length=2221214 Score = 104 bits (114), Expect = 2e-17 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 26370 TGATGATGGTAGAATATGTAAAATTTGTTATAATGAAGAAATCGGTGTTGTATTTTTACC 26429 |||||||| ||||| || ||||| ||||| ||||||||| | || || |||||| |||| Sbjct 1256334 TGATGATGCGAGAATGTGCAAAATATGTTACAATGAAGAATTGGGCGTGGTATTTCTACC 1256275 Query 26430 GTGTGGTCATATTGTAGCATGTATTAAATGTGCACCCGGAATGATGAATTGTCCAGTCTG 26489 |||||||||||| || || || |||| |||||||| || |||| || | || || Sbjct 1256274 GTGTGGTCATATGGTTGCTTGCGTTAAGTGTGCACCTGGCATGACATCCTGCGCTGTATG 1256215 Query 26490 TCGTAAACCAGT 26501 |||||| |||| Sbjct 1256214 CCGTAAATCAGT 1256203 Score = 104 bits (114), Expect = 2e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 26366 CAAATGATGATGGTAGAATATGTAAAATTTGTTATAATGAAGAAATCGGTGTTGTATTTT 26425 ||| || ||| | |||||||||||||| ||||||||||||||| | || || ||||| Sbjct 1266252 CAACTGTTGACGCAAGAATATGTAAAATATGTTATAATGAAGAATTAGGCGTGATATTTC 1266311 Query 26426 TACCGTGTGGTCATATTGTAGCATGTATTAAATGTGCACCCGGAATGATGAATTGTCCAG 26485 |||| ||||| ||||| || || || |||| |||||||| || |||| |||| ||| Sbjct 1266312 TACCTTGTGGACATATAGTTGCTTGCGTTAAGTGTGCACCGGGTATGACATTTTGTGCAG 1266371 Query 26486 TCTGTCGTAAACCAGTC 26502 | || || ||| || || Sbjct 1266372 TATGCCGCAAATCAATC 1266388 Score = 96.9 bits (106), Expect = 2e-15 Identities = 128/175 (73%), Gaps = 2/175 (1%) Strand=Plus/Plus Query 25605 AGCTGGATTGTATTATATTGGTGAAAATGATAGTGTTAAATGTTTTGAATGTAACGTTAC 25664 ||||||||| | |||| || || ||| | || | ||| ||||||||| | |||| Sbjct 1265028 AGCTGGATTTTTCTATACAGGAGAGGGTGACAAAGTCACATGCTTTGAATGTCATGTTAA 1265087 Query 25665 TATTATGA-AATGGGAAGAAGATGATGAACCTTTAGCATGTCATAAAAGATGGTCTGCAA 25723 || ||| |||||| ||||| || | ||| | | ||| | || |||||||||| Sbjct 1265088 GAT-ATGTCAATGGGTAGAAGGAGACAATCCTATGGTTGATCACCAGAGGTGGTCTGCAA 1265146 Query 25724 GATGTCGATTTATTAGAAAAATTGCTTGTGGAAATGTTCCAATAGGTATTGATCC 25778 | |||||||||||||| || ||| ||||||||||||| || || || || ||||| Sbjct 1265147 GGTGTCGATTTATTAGGAAGATTCCTTGTGGAAATGTACCGATTGGAATAGATCC 1265201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356516213991504