Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq6850 145 3e-32 seq47086 136 2e-29 seq43461 136 2e-29 seq15086 136 2e-29 seq7355 136 2e-29 seq35420 125 3e-26 seq38947 118 4e-24 seq5644 116 2e-23 seq16818 102 3e-19 >seq6850 Length=7053 Score = 145 bits (160), Expect = 3e-32 Identities = 219/313 (70%), Gaps = 34/313 (11%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-- 462 || ||||||||| ||||||||||||||||| |||| |||| |||||| |||||||| Sbjct 1098 CGACCCGTCTTGAAACACGGACCAAGGAGTTTAACGTCTACGCGAGTCATTGGGTGTTTA 1157 Query 463 AAACCCGTGCGCGTAATGAAAGTGAACGGAGG----TGG--GAACCC-----GTGA---- 507 ||||| |||||||||||||||| | | ||| || | |||| Sbjct 1158 AAACCTAAAGGCGTAATGAAAGTGAAGGTATCCTTTTGGATGATACTTATATGTGATCTG 1217 Query 508 --GGGT---------------GCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGA 550 |||| ||| ||| | || | || | ||| ||| | || Sbjct 1218 ATGGGTTGCGGCCCAACCGGAGCAACATAGCCCCGTTCTTGTCGCTTGCGATAGGGCGGA 1277 Query 551 GTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCC 610 | |||||| || |||| |||||||||||||||||||||||| ||| ||| |||| | Sbjct 1278 GGAAGAGCGTATGCGTTGAGACCCGAAAGATGGTGAACTATGCTTGAGCAGGACGAAGTC 1337 Query 611 AGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTG 670 ||||||||||||| |||| | || | |||||||| ||||||||||||||||| | ||| Sbjct 1338 AGAGGAAACTCTGATGGAAGTCCGAATCGGTTCTGACGTGCAAATCGATCGTCTGACTTG 1397 Query 671 GGTATAGGGGCGA 683 |||||||||||| Sbjct 1398 AGTATAGGGGCGA 1410 Score = 134 bits (148), Expect = 6e-29 Identities = 115/142 (81%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| ||||||||| || ||||| | || | || |||||| ||| |||| |||||| Sbjct 532 GAGTCGGGTTGTTTGGAAACGCAGCCCAAAGTAGGTGGTAAACTTCACCTAAGACTAAAT 591 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 |||| | |||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 592 ATTGCCACGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGTTGAAAAGTACTTTGAAG 651 Query 160 AGAGAGTTAAAAAGCACGTGAA 181 ||||||||||| |||||||||| Sbjct 652 AGAGAGTTAAAGAGCACGTGAA 673 >seq47086 Length=34395 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 16117 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 16058 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 16057 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 15998 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 15997 ATAGGGGCGA 15988 Score = 127 bits (140), Expect = 9e-27 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| ||||||| Sbjct 16951 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 16892 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 16891 ACAACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 16832 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 16831 AGAGAGTTCAAGAGTACGTGAAA 16809 Score = 75.2 bits (82), Expect = 5e-11 Identities = 68/83 (82%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGG-TG-TCAAA 465 ||||||||| |||||||||||||||||||||||| | |||||| ||||| || |||| Sbjct 16300 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGCGCGAGTCATTGGGATGCACAAA 16241 Query 466 CCCGTGCGCGTAATGAAAGTGAA 488 || ||| |||||||||||| Sbjct 16240 CCTAAAGGCGAAATGAAAGTGAA 16218 >seq43461 Length=16652 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 9810 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 9751 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 9750 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 9691 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 9690 ATAGGGGCGA 9681 Score = 127 bits (140), Expect = 9e-27 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| ||||||| Sbjct 10644 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 10585 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 10584 ACAACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 10525 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 10524 AGAGAGTTCAAGAGTACGTGAAA 10502 Score = 127 bits (140), Expect = 9e-27 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| ||||||| Sbjct 15804 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 15863 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 15864 ACAACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 15923 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 15924 AGAGAGTTCAAGAGTACGTGAAA 15946 Score = 75.2 bits (82), Expect = 5e-11 Identities = 68/83 (82%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGG-TG-TCAAA 465 ||||||||| |||||||||||||||||||||||| | |||||| ||||| || |||| Sbjct 9993 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGCGCGAGTCATTGGGATGCACAAA 9934 Query 466 CCCGTGCGCGTAATGAAAGTGAA 488 || ||| |||||||||||| Sbjct 9933 CCTAAAGGCGAAATGAAAGTGAA 9911 >seq15086 Length=10902 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 8714 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 8773 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 8774 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 8833 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 8834 ATAGGGGCGA 8843 Score = 127 bits (140), Expect = 9e-27 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| ||||||| Sbjct 7880 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 7939 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 7940 ACAACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 7999 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 8000 AGAGAGTTCAAGAGTACGTGAAA 8022 >seq7355 Length=4333 Score = 136 bits (150), Expect = 2e-29 Identities = 108/130 (83%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || |||||||||||||||||||||||||||||||| ||| |||| ||| Sbjct 1707 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 1648 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| |||||| || |||| ||||| ||||||||||||||||| | ||||| Sbjct 1647 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 1588 Query 674 ATAGGGGCGA 683 |||||||||| Sbjct 1587 ATAGGGGCGA 1578 Score = 75.2 bits (82), Expect = 5e-11 Identities = 68/83 (82%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGG-TG-TCAAA 465 ||||||||| |||||||||||||||||||||||| | |||||| ||||| || |||| Sbjct 1890 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGCGCGAGTCATTGGGATGCACAAA 1831 Query 466 CCCGTGCGCGTAATGAAAGTGAA 488 || ||| |||||||||||| Sbjct 1830 CCTAAAGGCGAAATGAAAGTGAA 1808 >seq35420 Length=64224 Score = 125 bits (138), Expect = 3e-26 Identities = 105/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 |||| || |||||| |||||||||||||||| ||||||||| ||| |||| ||| | Sbjct 14795 GAGCGTATATGTTGGAACCCGAAAGATGGTGAGCTATGCCTGGTCAGGACGAAGTCAGGG 14736 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||||| || |||| ||||| |||||||||||||||| | |||||| Sbjct 14735 GAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTACGAACTGGGTA 14676 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 14675 TAGGGGCGA 14667 >seq38947 Length=23633 Score = 118 bits (130), Expect = 4e-24 Identities = 104/130 (80%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||| || ||||||||||||||||||||||||| |||||| |||| |||| || Sbjct 13137 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTGTGCCTGGTTAGGACGAAGTCATG 13196 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||| ||| ||||| || |||| ||||| ||||||||||||||||| ||||| Sbjct 13197 GGAAACCCTGATGGAGATCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGTACTGGGT 13256 Query 674 ATAGGGGCGA 683 | |||||||| Sbjct 13257 AGAGGGGCGA 13266 >seq5644 Length=398 Score = 116 bits (128), Expect = 2e-23 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||||||||||||||||||||||| |||||| |||| |||| || |||||| ||| Sbjct 389 GTTGGGACCCGAAAGATGGTGAACTGTGCCTGGTTAGGACGAAGTCATGGGAAACCCTGA 330 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| || |||| ||||| ||||||||||||||||| |||||| |||||||| Sbjct 329 TGGAGATCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGTACTGGGTAGAGGGGCGA 271 >seq16818 Length=24007 Score = 102 bits (112), Expect = 3e-19 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 59 TGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAG 118 |||||| |||| |||| ||||| | | ||||| |||||||| | ||||||||||| Sbjct 23391 TGCAGCCCTAAGTGGGTAGTAAACTCCATCTAAGGCTAAATACAACCACGAGACCGATAG 23450 Query 119 CGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGT 178 || ||||||| |||| ||||| |||||| |||||| | |||||||| || || |||| Sbjct 23451 CGAACAAGTACCGTGAGGGAAAGTAGAAAAGAACTTTGAAGAGAGAGTTCAAGAGTACGT 23510 Query 179 GAAA 182 |||| Sbjct 23511 GAAA 23514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078915316400