Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq6850 82.4 2e-13 seq48442 78.8 2e-12 >seq6850 Length=7053 Score = 82.4 bits (90), Expect = 2e-13 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 49 GACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTC 108 ||||||| | |||||| || ||| |||| ||||| ||| | ||||| ||| |||| Sbjct 3028 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCGGGACTCATCCGACGAGGCATTTG 2969 Query 109 GCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAA 156 ||||||||| || || |||||||| ||||||||||| | |||||| Sbjct 2968 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTAA 2921 >seq48442 Length=621 Score = 78.8 bits (86), Expect = 2e-12 Identities = 76/98 (78%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 49 GACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTC 108 ||||||| | |||||| || ||| |||| ||||| ||| | ||||| ||| |||| Sbjct 520 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCGGGACTCATCCGACGAGGCATTTG 579 Query 109 GCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146 ||||||||| || || |||||||| ||||||||||| Sbjct 580 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTAC 617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1061862765568