Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= AAMG01001449.1 Length=395 Score E Sequences producing significant alignments: (Bits) Value seq24146 118 2e-24 >seq24146 Length=251 Score = 118 bits (130), Expect = 2e-24 Identities = 142/192 (74%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 1 CGACGGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGC 60 ||||||| ||| |||| ||||| | | ||| | ||| | ||||| |||||| | Sbjct 238 CGACGGCGATGGCTCGGTATGGAAAGAAACGCGGTTTCTATTCGTATTCATTACCATTCC 179 Query 61 CTGTGGCGCGGTCTCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCT 120 ||| | |||||| || ||||| |||||||||| | | |||| |||| ||| | || Sbjct 178 CTGCGACGCGGTGTCCAGTTTCTATGCGCTGATTGCTACCAGCACGGCGCCAAAGCTTCT 119 Query 121 CGCCAGTGAGAGCCATGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGT 180 |||| | | | | |||||||| |||||||||| || |||||||||||||| ||||| Sbjct 118 GGCCAATAAAACAC-TGCCCGTTTTATCGGTTACGACGCCATGCTGATGGAGTTATTCGT 60 Query 181 GGCCATCATGGC 192 ||||||||||| Sbjct 59 CGCCATCATGGC 48 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1161012602112