Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq15086 89.7 6e-16 seq16818 82.4 9e-14 >seq15086 Length=10902 Score = 89.7 bits (98), Expect = 6e-16 Identities = 104/133 (78%), Gaps = 8/133 (6%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| | |||||| ||| Sbjct 1911 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACAGAGTATTCAGGC 1853 Query 69 GTAAG---CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC- 124 | || |||||||||| ||||||||||| |||| ||||| || | || || || | Sbjct 1852 GAGAGTAGCCTGCTTTGAGCACTCTAATTTGTTCAAAGTAAACGTACCGG-CCCACCTCG 1794 Query 125 ACAC-CAATGAAG 136 |||| |||||||| Sbjct 1793 ACACTCAATGAAG 1781 >seq16818 Length=24007 Score = 82.4 bits (90), Expect = 9e-14 Identities = 100/132 (76%), Gaps = 6/132 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68 |||||| | |||||| || | ||||||||| |||||||||||| | |||||| ||| Sbjct 21223 AAACCAGCGAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACAGAGTATTCAGGC 21165 Query 69 GTAAG---CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 | || |||||||||| ||||||||||| |||| ||||| || | || || | | Sbjct 21164 GAGAGTAGCCTGCTTTGAGCACTCTAATTTGTTCAAAGTAAACGTACCGGCTCACCTCGA 21105 Query 126 CAC-CAATGAAG 136 ||| |||||||| Sbjct 21104 CACTCAATGAAG 21093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594908424912