Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq10676 181 3e-43 >seq10676 Length=335 Score = 181 bits (200), Expect = 3e-43 Identities = 240/332 (72%), Gaps = 6/332 (2%) Strand=Plus/Plus Query 93 AGCACACGAGGGCTGGGCTGCAGGAAACTGTTTTCGTGAACCTTGTTGATGAAGTACTGC 152 ||||| || ||||| ||| ||| ||| ||||| || |||| ||||| |||| ||| Sbjct 1 AGCACGCGCGGGCTAGGCCGCATGAAGCTGTTGCTATGGACCTGTTTGATAAAGTGTTGC 60 Query 153 AGCATCTTCTCGCAGACGCTGAAGTCGGCGATCACGCCGTCTTTCATCGGACGAATGGCA 212 |||||||||||| |||| ||| |||||||| ||||| || ||||| || || || || Sbjct 61 AGCATCTTCTCGGTGACGAAGAAATCGGCGATAACGCCATCCTTCATTGGCCGGATAGCC 120 Query 213 GCAATATTGCCTGGTGTACGGCCGAGCATGCGCTTGGCCTCGGTGCCGACGGCAACGACA 272 || || ||||| || ||||| || ||||| | || || || ||||||||| | || Sbjct 121 GCTATGTTGCCGGGCGTACGCCCAAGCATCTGTTTCGCTTCATGGCCGACGGCCGCAACG 180 Query 273 CTTTTC--TGATTACCATGGGTC----CGAATGGCCACAACCGATGGCTCATTCAGGACG 326 |||||| ||| | |||| ||||| || || || || || || |||||||| Sbjct 181 CTTTTCGGTGAGCCCGCGCGGTCCTGTCGAATAGCAACGACGGAAGGTTCGTTCAGGACA 240 Query 327 ATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCG 386 || || | | || |||||||| || ||||| ||||||| |||||||| | || Sbjct 241 ATGCCCTGTCCTTTTACATAAATAAGAGTATTGGCGGTGCCCAAATCAATGGACAAGTCA 300 Query 387 CTGGAAAACATGCCACGCAGTTTCTTGAACAT 418 |||||||||||||||| | ||| || ||||| Sbjct 301 TTGGAAAACATGCCACGAAATTTTTTAAACAT 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1352915511552