Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq16818 91.5 2e-16 >seq16818 Length=24007 Score = 91.5 bits (100), Expect = 2e-16 Identities = 157/222 (71%), Gaps = 7/222 (3%) Strand=Plus/Minus Query 73 CTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCA--CTCAAGAAAAA 130 |||| | | || ||||||||| ||||||| || || |||||| | ||| || Sbjct 23965 CTACACTTGTCGCCGCTACACTTGGAATTCT-AT--CCCCTCCAGGAGACTCTAGCCTGC 23909 Query 131 CAGTTTCAAATGCAGG-CTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCC 189 |||||||||||||| | | ||| ||| | | ||| ||||||||||| | || Sbjct 23908 TAGTTTCAAATGCAGTTCCCTAAGTTAAGCTTAGGGATTTTACATCTGACTTAACAAACC 23849 Query 190 GCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGC 249 || | | | |||||| |||| ||| |||| |||||||||| ||| ||||||||| Sbjct 23848 GCTTGCGTACGCTTTACGCCCAGTAATTCCGATTAACGCTTGCGCCCTCCGTATTACCCT 23789 Query 250 GGCTG-CTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||| | | |||| |||||||| |||| ||| |||||| Sbjct 23788 GGCTGTCAGCCACGGCGTTAGCCGGTGCTTCTTCTGCAGGTA 23747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828393989528