Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq50065 111 2e-22 >seq50065 Length=546 Score = 111 bits (122), Expect = 2e-22 Identities = 127/168 (76%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 107 CCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGG 166 || |||||||| ||| | | | || |||||||| |||| ||||||| |||| | Sbjct 3 CCAGTCCTCTCCTACCAGGAGCCGC-CCTCTCAATCTTCCAGAGCCCACGGAAGATAAAG 61 Query 167 ACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGC 226 ||||||| |||| |||| |||| || | || |||||| || |||||| ||||||||| Sbjct 62 GCCGAACTATCTCACGACATTCTAAATCTAGATCGCGTACCACTTTAAATGGCGAACAGG 121 Query 227 CCAACCCT-TGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACAT 273 ||| |||||||||||| |||||||||||| || ||| |||||| Sbjct 122 GATTACCTCTGGGACCTACTTTAGCCCCAGGATGTGATGAGGCGACAT 169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780417503648