Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq16818 100 9e-19 >seq16818 Length=24007 Score = 100 bits (110), Expect = 9e-19 Identities = 97/122 (80%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 380 TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAG-CAGCCGCGGTAATACGT 438 ||||| ||| || || ||||| ||||||||| |||| | | ||||| ||||||||| Sbjct 23741 TGACGTTACCTGCAGAAGAAGCACCGGCTAACGCCGTGGCTGACAGCCAGGGTAATACGG 23800 Query 439 AGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498 |||| || ||||||| |||||||||| |||||||||| || || | | ||||| ||||| Sbjct 23801 AGGGCGCAAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTACGCAAGCGGTTTGTTAAG 23859 Query 499 TC 500 || Sbjct 23860 TC 23861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1496842693632