Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq28445 129 1e-27 >seq28445 Length=237 Score = 129 bits (142), Expect = 1e-27 Identities = 165/226 (73%), Gaps = 6/226 (3%) Strand=Plus/Plus Query 31 AGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAG-TGAGCAAACACACTTTG 89 |||||||||||||||| || ||||| |||| ||| ||| ||| | | | | Sbjct 4 AGGCGATGAAGGACGTGCTAATCTGCGAAAAGCGCCGGTGAGCTGATATGAAGCGTTATC 63 Query 90 ATCCGCAGATTTCCGAATGGGGAAACCCGG-----CCCTTTGGGTCATTGCATGCTGAAT 144 | ||| ||| ||||||||||||||||||| | | ||| ||| | | ||||| Sbjct 64 AGCCGACGATGTCCGAATGGGGAAACCCGGTGCAACTCGTTGCACCATCGTCAGGTGAAT 123 Query 145 ACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAA 204 ||||| | | | |||||| || |||||||||||||| |||| | |||||||||| Sbjct 124 CCATAGCTTGACGAGGCGAACCAGGGGAACTGAAACATCTCAGTACCCTGAGGAAAAGAA 183 Query 205 ATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCC 250 |||||||||||||||| ||||| |||||||||| |||| |||| Sbjct 184 ATCAACCGAGATTCCCCTAGTAGCGGCGAGCGAACGGGGAACAGCC 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917935583488