Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq6850 82.4 1e-13 >seq6850 Length=7053 Score = 82.4 bits (90), Expect = 1e-13 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||||| || | || || | || | Sbjct 3727 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTTTATGTGCTTGGTCGATAGGCCAAT 3784 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||| ||||||||||| ||||||| |||||||||||||||| ||||||| Sbjct 3785 GGTGCGATGCTACCATCTGAGGGATTATAACTGAACGCCTCTAAGTTAGAATCC 3838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818798692352