Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq50200 143 7e-30 >seq50200 Length=540 Score = 143 bits (158), Expect = 7e-30 Identities = 261/382 (68%), Gaps = 0/382 (0%) Strand=Plus/Minus Query 38065 GGACGAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCG 38124 |||| | ||| ||| ||||||| ||| |||||||| ||||| ||||||||| Sbjct 540 GGACAAAATGGCCCTGGCGCCGTGCCATGCGTTATTTCAGTTTTATGTTGCCAACGGCAC 481 Query 38125 GTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACAT 38184 ||||| || | | |||||||| |||| || | || |||||||||| || Sbjct 480 CTTGTCCTGTCAGCTCTATCAGCGCTCATGCGATATTTTCCTCGGCCTGCCGTTTAATAT 421 Query 38185 CGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGA 38244 ||| ||||| || || || |||||| | || || || ||||| ||| | ||| |||| Sbjct 420 CGCCAGCTATGCCTTGCTGGTACATATGCTGGCGCAGCAGTGCGATTTGCAGGTCTGTGA 361 Query 38245 ACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACT 38304 || | | ||||| ||||| |||| | |||| || ||| || | || ||| | || Sbjct 360 TTTCGTCTGGACCGGAGGCGATACCCATCTCTACAGTAACCATTTGCAGCAGGCGGACCT 301 Query 38305 GCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTGTGCTGAAACGGAAGCCGCCGTC 38364 |||||| || || || || | ||||||||| |||| || | || || ||| || | Sbjct 300 GCAGCTAACCCGTGATCCTCTGCCGCTGCCGCAGCTGCTGATTAAGCGCCGTCCGGCGAC 241 Query 38365 TATCTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTACGATCCGCATCCGGCGAT 38424 | | ||||| | || || ||||| | ||||||||||| || || || || Sbjct 240 ATTGCTCGACTACCGTTTTGAGGATTTTGAGCTGACGGGCTACGATCCCCACCCAGCAAT 181 Query 38425 TAAAGCACCGGTGGCGGTTTAA 38446 |||||||||||||| |||||| Sbjct 180 CAAAGCACCGGTGGCAGTTTAA 159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130561551333200