Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq48246 109 4e-19 >seq48246 Length=3565318 Score = 109 bits (120), Expect = 4e-19 Identities = 143/194 (74%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG- 61262 || || || || ||||| || || || ||||||||||| ||||||||| | | ||||| Sbjct 2532380 CACGTATTAGCATTCTTCGCGGCATCCGACGGTATCGTTAATGAGAATCTCGTAGAACGA 2532321 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || || || || |||||| | ||||| || |||||||| ||||| || | || || Sbjct 2532320 TTTAGC-CAAGAAGTTCAAGTGACAGAGGCACGCTGTTTCTATGGCTTTCAAGTAGCGAT 2532262 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA-GCGGG 61381 |||||| || ||||| || |||||| | | || || || ||||||| ||| || Sbjct 2532261 GGAGAACGTGCACTCAGAAATGTACTCCTTATTAATTGACACATACATCACGGACGCCAA 2532202 Query 61382 CGGAACGTGAACGA 61395 | || |||||||| Sbjct 2532201 TGAAAGGTGAACGA 2532188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397322979835520