Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25]
50,568 sequences; 199,936,949 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq48246 109 4e-19
>seq48246
Length=3565318
Score = 109 bits (120), Expect = 4e-19
Identities = 143/194 (74%), Gaps = 3/194 (2%)
Strand=Plus/Minus
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG- 61262
|| || || || ||||| || || || ||||||||||| ||||||||| | | |||||
Sbjct 2532380 CACGTATTAGCATTCTTCGCGGCATCCGACGGTATCGTTAATGAGAATCTCGTAGAACGA 2532321
Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| || || || || |||||| | ||||| || |||||||| ||||| || | || ||
Sbjct 2532320 TTTAGC-CAAGAAGTTCAAGTGACAGAGGCACGCTGTTTCTATGGCTTTCAAGTAGCGAT 2532262
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA-GCGGG 61381
|||||| || ||||| || |||||| | | || || || ||||||| ||| ||
Sbjct 2532261 GGAGAACGTGCACTCAGAAATGTACTCCTTATTAATTGACACATACATCACGGACGCCAA 2532202
Query 61382 CGGAACGTGAACGA 61395
| || ||||||||
Sbjct 2532201 TGAAAGGTGAACGA 2532188
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397322979835520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |