Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq45834 84.2 9e-11 >seq45834 Length=1467924 Score = 84.2 bits (92), Expect = 9e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 349082 ATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGG 349141 ||||| || | ||||||| |||||||||||||||||| | || || || || |||||| Sbjct 1358583 ATCTCTTTCAACCTGGGCACGCCCAGGGTCACGTTCTTCGACGATACACCCGCGAAGTGG 1358524 Query 349142 AAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCT 349201 || || | | |||| ||| || ||||||||||| |||| | || | ||| Sbjct 1358523 AACGTGTTCAAAGTCATCTGGGTCGCGGGCTCGCCGAGCGACTGCGCGGCCAATGCGCCC 1358464 Query 349202 ACCATCTCGCCGGGCG 349217 ||||| |||||||||| Sbjct 1358463 ACCATTTCGCCGGGCG 1358448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2083355548169264