Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratina_20calcarata_20[refseq_20GCF_5F001652005.1_202016-05-25] 50,568 sequences; 199,936,949 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq3379 89.7 1e-13 >seq3379 Length=438 Score = 89.7 bits (98), Expect = 1e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 33751 ACTACGCGGTGCCATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCTTATCATTCCATGAT 33810 || |||||||||||||| |||| ||||||| |||| || || ||| || ||| Sbjct 3 ACCACGCGGTGCCATTCCGTTTTCTCCTTTGTCTCGCCGGTTTGCTTGTCGCGCCAGCTC 62 Query 33811 TCCGATGTAGCAACAGATACGTTGGCAACAGCGCCGCCATTTGGCATGTATCGCACTTCT 33870 ||||| || || | | | |||||| || || || ||||| ||||| || || ||||| Sbjct 63 TCCGAAGTGGCCAGCGTAATGTTGGCTACCGCACCACCATTAGGCATATAGCGGACTTCC 122 Query 33871 GGGTCCTGGCCTAATGTGCCGAGGATGATTACTTTATTTACGCC 33914 || |||||||| | | |||| | || |||||||| ||||| Sbjct 123 GGATCCTGGCCCAGGTTTCCGACTAGAATCACTTTATTAACGCC 166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144885744558464