Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21] 1,806 sequences; 479,047,742 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq322 141 1e-31 seq1132 91.5 2e-16 >seq322 Length=274070 Score = 141 bits (156), Expect = 1e-31 Identities = 176/229 (77%), Gaps = 13/229 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 54613 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 54556 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAA-AGA 117 | ||| | | |||| | || | | ||||| | || || || | |||| || Sbjct 54555 CAAGTTTATGTG-AACAGTCTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCAGT 54499 Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATC-AGTGTAGCGCGCGT 176 |||||||||||| ||| | ||| ||| || ||||| ||| || | |||||||||||| Sbjct 54498 TTACCCGGACCTCTCGCTCTAGGAAATACAC--GTTGA-TACTTCCATTGTAGCGCGCGT 54442 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||| || |||||||||||||||| ||||| || Sbjct 54441 GCAGCCCAGGACATCTAAGGCCACCACAGACCTGTTATTG-CTCAATCT 54394 >seq1132 Length=42948 Score = 91.5 bits (100), Expect = 2e-16 Identities = 164/230 (71%), Gaps = 15/230 (7%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||| || || ||| || | || ||||| | | ||||| |||| ||| Sbjct 30595 GTACAAAGGGCAGGCACATAATCATTTCGTG-TTAATGACACACATTTACT-GGAAATTC 30538 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAA----TTTCAAAG 116 | || | | |||| || || | | ||||| | || ||||| ||| | Sbjct 30537 CAATTTCATGTG-AACAGTTACAGTTCACAATCCCAAGCA---TGAAAGTGGTTTAGCGG 30482 Query 117 ATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCG 175 |||||| ||||| |||| | || ||| |||||||| ||| | || ||||||||||| Sbjct 30481 TTTACCCAGACCTCTCGGTCTTGGAAATA--CTCGTTGA-TACTTTCACTGTAGCGCGCG 30425 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||| | | |||||||||||||||||| ||||||||||| ||||| || Sbjct 30424 TGCAGAGTATTACATCTAAGGGCATCACATACCTGTTATTG-CTCAATCT 30376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751986843290