Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21] 1,806 sequences; 479,047,742 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq322 127 4e-27 seq973 73.4 7e-11 >seq322 Length=274070 Score = 127 bits (140), Expect = 4e-27 Identities = 184/251 (73%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT---TGCTCGAATACATTA-GCAT 130 |||||||||| ||||||||||| | ||||||||| ||| ||||| || |||| Sbjct 53615 TTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTCCAAATGCCTGAATATTTTGTGCAT 53674 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATG 188 |||||||| |||| ||| | | |||||| ||| ||||||| ||| || | || ||| Sbjct 53675 GGAATAATGAAATAAGACCT-CTGTTCTACTTTCATTGGTTTTTAGATCCAGAGGTGATG 53733 Query 189 ATTAATAGGGATAGTC-GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||| ||| ||||| | || ||| | ||| |||||||||||||| Sbjct 53734 ATTAATAGAAGCAGTTTGGGGGCATTAGCATTACGACGCGAGAAGTGAAATTCTTGGACC 53793 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||||||||| ||||||| || |||| |||||||||||||||||| |||| Sbjct 53794 GTCGTAAGACTAACTTAAGCGAAAGTATTTGCCAAAGATGTTTTCATTAATCAG-CAACG 53852 Query 308 AAAGTTAGGGG 318 |||||||| || Sbjct 53853 AAAGTTAGAGG 53863 >seq973 Length=78728 Score = 73.4 bits (80), Expect = 7e-11 Identities = 120/168 (71%), Gaps = 4/168 (2%) Strand=Plus/Plus Query 154 GTTCTATTTTG-TTGGTTTCTAGGACC-GCCGTAATGATTAATAGGGATAGTC-GGGGGT 210 |||||| ||| ||||||| ||| | | ||||||||||| | ||| ||||| Sbjct 28808 GTTCTACTTTCATTGGTTTTTAGATCAAGAGGTAATGATTAAACGAAGCAGTTTGGGGGC 28867 Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270 | |||||| | ||| |||||||||||||| || ||||||| ||||| Sbjct 28868 ATTAGTATTACGACGCGAGAAGTGAAATTCTTGGACCGTCGTAATACTAACTTAAGCGAA 28927 Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || || |||| ||||||||||||||||| ||||||||||||| || Sbjct 28928 AGTATTTGCCAAAGATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 28974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915183471488