Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21] 1,806 sequences; 479,047,742 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq973 122 4e-25 seq322 120 1e-24 >seq973 Length=78728 Score = 122 bits (134), Expect = 4e-25 Identities = 103/127 (81%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 557 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 616 ||||| || || |||||||||||||||||||||| | ||| ||| ||||| ||| ||| Sbjct 16324 GCATATATGCTGTGACCCGAAAGATGGTGAACTATACTTGATCAGGTTGAAGTCAGGGGA 16383 Query 617 AACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676 ||| ||| |||| | || | | |||||| ||||||||||||| |||| | ||| ||||| Sbjct 16384 AACCCTGATGGAAGACCGAAACAGTTCTGACGTGCAAATCGATTGTCAGAATTGAGTATA 16443 Query 677 GGGGCGA 683 ||||||| Sbjct 16444 GGGGCGA 16450 >seq322 Length=274070 Score = 120 bits (132), Expect = 1e-24 Identities = 119/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| | |||||| |||| |||| |||||| | | |||||| |||||| Sbjct 56540 GAGTCGTGTTGCTTGATAGTGCAGCACTAAGTGGGTGGTAAACTCCATCTAAAACTAAAT 56599 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || | ||||||||||| ||||||| |||| ||||| ||||||| ||| || | Sbjct 56600 ATAACCATGAGACCGATAGTAAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTCTGAAT 56659 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193 ||||||||||| || |||||||| || | | ||| Sbjct 56660 AGAGAGTTAAATAGTACGTGAAACTGCTTAGAGG 56693 Score = 107 bits (118), Expect = 8e-21 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||||| || || |||||||||||||||||| || | ||| | | ||||| ||| | Sbjct 57261 GAGCATATATGCTGTGACCCGAAAGATGGTGAATCATACTTGATCAAGTTGAAGTCAGGG 57320 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||| ||| |||| | || | |||||| ||||||||||||| |||| | ||| ||| Sbjct 57321 GAAACCCTGATGGAAGACCGTTACAGTTCTGACGTGCAAATCGATTGTCAGAATTGAGTA 57380 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 57381 TAGGGGCGA 57389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079961261300