Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21] 1,806 sequences; 479,047,742 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq973 293 4e-77 >seq973 Length=78728 Score = 293 bits (324), Expect = 4e-77 Identities = 213/243 (88%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 54704 TCATTAGTAGGGTAAAACTAACCTGTCTCGCGACGGTCTAAACCCAGCTCACGTTCCCT- 54646 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 | | ||||||||||||||||||||| ||||| |||||| ||||||||||||||||| Sbjct 54645 TGAATGGGTGAACAATCCAACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCGA 54586 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 54585 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 54526 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGATAG 269 ||||||||||||||||| |||||| | | ||| || | | ||||||||||||| Sbjct 54525 CTGTGGTAACTTTTCTGATACCTCTTG-TTAAAAACTCTTTAAACCAAAAGGATCGATAG 54467 Query 270 GCC 272 ||| Sbjct 54466 GCC 54464 Score = 232 bits (256), Expect = 1e-58 Identities = 199/244 (82%), Gaps = 14/244 (6%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| |||||||||||||||| |||| |||||||||||||| |||| || ||||||||| Sbjct 19659 GTCATTAGTAGGGTAAAACTAAACTGTTTCATGACGGTCTAAGCCCAACTTACGTTCCCT 19600 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | | |||||||| |||||| ||||| ||||| |||||| |||||||||||||||| Sbjct 19599 -TGAATGGGTGAAAAATCCAGCGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCG 19541 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||| |||||||||| ||||||||||||| |||| Sbjct 19540 ACATCGAAGGATCAAAAAGCGACGTCGCTATAAACGCTTGGCTGC-----------TATC 19492 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGATA 268 |||||||||||||||||| ||||||| | | ||| || | | |||||||||||| Sbjct 19491 CCTGTGGTAACTTTTCTGACACCTCTTG-TTAAAAACTCTTTAAACCAAAAGGATCGATA 19433 Query 269 GGCC 272 |||| Sbjct 19432 GGCC 19429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854384569536