Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21] 1,806 sequences; 479,047,742 total letters Query= NC_032157.1 Length=1694 Score E Sequences producing significant alignments: (Bits) Value seq442 188 8e-45 >seq442 Length=5223522 Score = 188 bits (208), Expect = 8e-45 Identities = 171/215 (80%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 441 ATGCCTACAGGTCAACACCTGTCTAAAACTAATTCCGAATTGAAGAATGATCCTCTTTAT 500 |||||||| || ||||| | ||||| |||||||| ||||||||||| ||||| | ||| Sbjct 307369 ATGCCTACGGGCCAACATTTATCTAAGACTAATTCAGAATTGAAGAACGATCCATTATAT 307310 Query 501 TTAGAAGCATTTTTTCCATCACCTAGCGAAGAGCTAGTTCCGTTGCCTGAAGAGCTCAAT 560 |||||||| || ||||| ||||| | ||||| |||||||| | ||||||| | ||| Sbjct 307309 TTAGAAGCGTTCTTTCCTTCACCGACTGAAGAACTAGTTCCAATCGCTGAAGAATTAAAT 307250 Query 561 CATTTTACGGGTTTTGACGGTTTAAGTTCAATAATTAATGAAAGTTATGATAATTT---T 617 |||||| |||||||||| ||||||| | | |||||||||||| |||||| | ||| Sbjct 307249 CATTTTTCGGGTTTTGATGGTTTAACTACGTTAATTAATGAAACTTATGAAAGTTTCTCA 307190 Query 618 TGTTCACATAGTTTAAATTTCAAGCGTTCTGTTTC 652 | ||||| ||||||||||| ||||||| ||| || Sbjct 307189 TCATCACACAGTTTAAATTTTAAGCGTTTTGTATC 307155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5311898069360