Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratitis_20capitata_20[refseq_20GCF_5F000347755.2_202013-03-21] 1,806 sequences; 479,047,742 total letters Query= NC_033486.1 Length=1672 Score E Sequences producing significant alignments: (Bits) Value seq442 196 5e-47 >seq442 Length=5223522 Score = 196 bits (216), Expect = 5e-47 Identities = 181/229 (79%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 463 ACTATGCCAACTGGCCAACATTTGTCAAAAACAAATTCTGAGTTTAAAAATGATCCTTTA 522 || ||||| || ||||||||||| || || || ||||| || || || || ||||| ||| Sbjct 307372 ACAATGCCTACGGGCCAACATTTATCTAAGACTAATTCAGAATTGAAGAACGATCCATTA 307313 Query 523 TATTTAGAAGCATTCATGCCTTCTCCTTCCGAGGAGTTGGTTCCAATAGCCGAAGAGTTA 582 ||||||||||| ||| | ||||| || | || || | |||||||| || ||||| ||| Sbjct 307312 TATTTAGAAGCGTTCTTTCCTTCACCGACTGAAGAACTAGTTCCAATCGCTGAAGAATTA 307253 Query 583 AATCATTTTCCGGGTTTTGATGGTTTAACCACATTAATTGAAGAAACATATGAAAATTT- 641 ||||||||| ||||||||||||||||||| || |||||| | ||||| ||||||| ||| Sbjct 307252 AATCATTTTTCGGGTTTTGATGGTTTAACTACGTTAATTAATGAAACTTATGAAAGTTTC 307193 Query 642 --TTCTGCACATAATTTAAACTTTAAACGTTCTGTATCTTTATCTGCTT 688 || |||| | |||||| ||||| |||| ||||||| | |||| || Sbjct 307192 TCATCATCACACAGTTTAAATTTTAAGCGTTTTGTATCTGTTTCTGATT 307144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 5241499420248