Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2277 185 1e-44 >seq2277 Length=214 Score = 185 bits (204), Expect = 1e-44 Identities = 166/204 (81%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 199 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 142 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || |||||||| | ||||| | ||||| | | |||| | || Sbjct 141 CTCGTTCATGGGGAATAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTT 82 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| |||| || || | ||| || ||| | | ||||||||||||||||||| Sbjct 81 ACCCGGGCCTTTCGGTCAGGGAG---GACACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 25 Query 180 GCCCAGAACATCTAAGGGCATCAC 203 |||||||||||||||||||||||| Sbjct 24 GCCCAGAACATCTAAGGGCATCAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751982100755