Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1605 185 2e-44 >seq1605 Length=367 Score = 185 bits (204), Expect = 2e-44 Identities = 198/255 (78%), Gaps = 10/255 (4%) Strand=Plus/Plus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC---TTTGCTCGAATACATTA- 126 || ||||||||||| ||||||||||| ||||||||||| || || |||||| | Sbjct 1 ACGTTTACTTTGAACAAATTAGAGTGCTCAAAGCAGGCTATGTTCGCCTGAATACTGTGT 60 Query 127 GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG--- 183 |||||||||||| ||||||||| | |||||||||||||||||||| | ||| | ||| Sbjct 61 GCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCCGAGG 118 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||||||||||||||| || ||||| | ||||| || |||||||||||||||| Sbjct 119 TAATGATTAATAGGGACAGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTG 178 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 ||| ||||| || |||||||| || |||| |||||||||||||||| | Sbjct 179 GATCGTCGCAAGACGGACAGAAGCGAAAGCATTTGCCAAAAATGTTTTCATTAATCA-AG 237 Query 304 AACGAAAGTTAGGGG 318 |||||||||||| || Sbjct 238 AACGAAAGTTAGAGG 252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915177513536