Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013
-12-04] 2,457 sequences; 277,059,195 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1975 136 2e-29
seq1469 123 1e-25
>seq1975
Length=252
Score = 136 bits (150), Expect = 2e-29
Identities = 108/130 (83%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613
||||| || |||||||||||||||||||||||||||||||| ||| |||| |||
Sbjct 64 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 123
Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673
|||||| ||| |||||| || |||| ||||| ||||||||||||||||| | |||||
Sbjct 124 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 183
Query 674 ATAGGGGCGA 683
||||||||||
Sbjct 184 ATAGGGGCGA 193
>seq1469
Length=450
Score = 123 bits (136), Expect = 1e-25
Identities = 110/135 (81%), Gaps = 2/135 (1%)
Strand=Plus/Minus
Query 49 TGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCA- 107
|| ||| || ||||||||||| | || |||||| | | ||||| ||||||||| | |||
Sbjct 450 TGCTTGAGAGTGCAGCTCTAAGTTGGTGGTAAACTCCATCTAAGGCTAAATAT-GACCAC 392
Query 108 GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTT 167
||||||||||||| ||||||| |||| ||||| ||||||| |||||| | ||||||||
Sbjct 391 GAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAGAGAGAGTT 332
Query 168 AAAAAGCACGTGAAA 182
|| || ||||||||
Sbjct 331 CAAGAGTACGTGAAA 317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079947297350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |