Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= AAMG01001449.1 Length=395 Score E Sequences producing significant alignments: (Bits) Value seq774 228 2e-57 >seq774 Length=861 Score = 228 bits (252), Expect = 2e-57 Identities = 253/336 (75%), Gaps = 15/336 (4%) Strand=Plus/Plus Query 1 CGACGGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGC 60 |||||| |||||| |||| |||| || |||||||||||||||||| |||||||| || Sbjct 70 CGACGGTACCGGCCCGGTCTGGACCGGTAACCTGTTCCCGTTCCTGTTTATCACCATCGC 129 Query 61 CTGTGGCGCGGTCTCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCT 120 ||| |||||||| ||||| ||||| ||||||||| | || || |||||||| ||| |||| Sbjct 130 CTGCGGCGCGGTGTCGGGCTTCCACGCGCTGATCGCTTCCGGAACCACGCCGAAGATGCT 189 Query 121 CGCCAGTGAGAGCCATGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGT 180 || | ||| | || ||| | ||||| |||||||||||||||||||| || || || Sbjct 190 GGCGAATGAAAATCAGGCCTGCCTGATCGGCTACGGCGGCATGCTGATGGAATCCTTTGT 249 Query 181 GGCCATCATGGCGATGGTTGCCGCCTCGGTGATTGAGCCCGGCGTGTACTTCGCCATGAA 240 ||||||||||| |||| | |||| | || || || |||||||||||||| ||||| Sbjct 250 CGCCATCATGGCACTGGTCTCTGCCTGTATTATCGATCCGGGCGTGTACTTCGCGATGAA 309 Query 241 CAGCCCG--------GCTGCCATTGTC-GGCACC---GACGTGGT---CACCGTGGCGCA 285 ||||||| ||| || | | |||||| |||||||| ||| ||||| Sbjct 310 CAGCCCGATGGCGGTACTGGCACCGGCTGGCACCGTTGACGTGGTGGCGTCCGCCGCGCA 369 Query 286 AACCGTCAGCAGTTGGGGCTTTGCCATTACGCCTGA 321 || ||| | ||||||||||| ||||| ||||| Sbjct 370 GGTGGTGAGCGGCTGGGGCTTTGCGATTACCCCTGA 405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1161571459488