Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013 -12-04] 2,457 sequences; 277,059,195 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1552 288 3e-75 >seq1552 Length=401 Score = 288 bits (318), Expect = 3e-75 Identities = 309/405 (76%), Gaps = 34/405 (8%) Strand=Plus/Plus Query 128 CTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACT 187 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 1 CTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCATGGTAGGCGCAG 60 Query 188 ATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCC 247 | ||||||||||| |||||||| |||||| ||||||| || | ||||||| || || || Sbjct 61 AACCTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGGTTCGAGACC 120 Query 248 ATGCGATTCGTT--AAGTTATTATGAATCACCAAGGAGCCCC---GAAGGGC-------- 294 |||||| | | |||||||| || ||||||||| | || |||| Sbjct 121 GTGCGATCAGCTCAAAGTTATTCAGAGTCACCAAGGTAAACGATGGACGGGCCAGGCCCC 180 Query 295 -----GTTGGTTTTTTATCTAATAAATACACCCCTTCCGAA----GTCGGGGTTT---TT 342 | | | |||| |||||||||| | ||||||| |||||| | || Sbjct 181 CCACCGATTGGTTTTGATCTAATAAAAGCGTCCCTTCCATCTCTGGTCGGGACTCAAGTT 240 Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACTATCAAAT 399 |||||||||||||||||||||||||| |||||||| ||| || ||||| ||| || Sbjct 241 TGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTG-GGTACGATCTAAG 299 Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT--GCTTATACTT 457 ||| ||||||||||||||||||||||||| ||||||| || ||| || | ||| Sbjct 300 GAACCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTA---ATTCGGCATGCACTG 356 Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGC 502 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 357 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGC 401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510362889472