Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratosolen_20solmsi_20marchali_20[refseq_20GCF_5F000503995.1_202013
-12-04] 2,457 sequences; 277,059,195 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq1552 288 3e-75
>seq1552
Length=401
Score = 288 bits (318), Expect = 3e-75
Identities = 309/405 (76%), Gaps = 34/405 (8%)
Strand=Plus/Plus
Query 128 CTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACT 187
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 1 CTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCATGGTAGGCGCAG 60
Query 188 ATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCC 247
| ||||||||||| |||||||| |||||| ||||||| || | ||||||| || || ||
Sbjct 61 AACCTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGGTTCGAGACC 120
Query 248 ATGCGATTCGTT--AAGTTATTATGAATCACCAAGGAGCCCC---GAAGGGC-------- 294
|||||| | | |||||||| || ||||||||| | || ||||
Sbjct 121 GTGCGATCAGCTCAAAGTTATTCAGAGTCACCAAGGTAAACGATGGACGGGCCAGGCCCC 180
Query 295 -----GTTGGTTTTTTATCTAATAAATACACCCCTTCCGAA----GTCGGGGTTT---TT 342
| | | |||| |||||||||| | ||||||| |||||| | ||
Sbjct 181 CCACCGATTGGTTTTGATCTAATAAAAGCGTCCCTTCCATCTCTGGTCGGGACTCAAGTT 240
Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACTATCAAAT 399
|||||||||||||||||||||||||| |||||||| ||| || ||||| ||| ||
Sbjct 241 TGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTG-GGTACGATCTAAG 299
Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT--GCTTATACTT 457
||| ||||||||||||||||||||||||| ||||||| || ||| || | |||
Sbjct 300 GAACCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTA---ATTCGGCATGCACTG 356
Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGC 502
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 357 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGC 401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510362889472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |