Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq26485 149 9e-34 seq32436 87.8 3e-15 >seq26485 Length=2545 Score = 149 bits (164), Expect = 9e-34 Identities = 120/141 (85%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||| |||||| ||| ||| || ||||||| | ||||||||||||| | Sbjct 2271 GTACAAAGGGCAGAGACGTAATCAGCGC-AGGATGATGACCTACACTTACTAGGAATT-C 2214 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| |||||||| |||| ||| | |||||||||||||||||||| ||| | |||||| Sbjct 2213 CTCGTTCAAGACCAATAATTACAAAGGTCTATCCCCATCACGATGAACTTTGACAAGATT 2154 Query 120 ACCCGGACCTGTCGGCCAAGG 140 |||| ||||| |||||||||| Sbjct 2153 ACCCAGACCTCTCGGCCAAGG 2133 >seq32436 Length=1664 Score = 87.8 bits (96), Expect = 3e-15 Identities = 53/56 (95%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 || |||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 859 CATTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACGGACCTGTTATTGC 804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751411685255