Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq26485 156 8e-36 >seq26485 Length=2545 Score = 156 bits (172), Expect = 8e-36 Identities = 185/252 (73%), Gaps = 18/252 (7%) Strand=Plus/Plus Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC----------------CT 110 |||| | ||||||||||| ||| ||||||||| || |||||| || Sbjct 856 CAGGTCGTTTACTTTGAATAAAATAGAGTGTTTAAGGCAGGCAAAAGGGGCGAAAGCTCT 915 Query 111 T-TGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGT 169 || | ||||| ||||||||||||||| ||||||||| | |||||| |||||||||| Sbjct 916 AGTGTTTGAATAACTTAGCATGGAATAATGGAATAGGACTTT-GGTTCTGTTTTGTTGGT 974 Query 170 TTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAG 229 || |||||| ||||||||||||||||| |||||||| | |||||| | ||||| Sbjct 975 TTAAAGGACCATGGTAATGATTAATAGGGACGGTCGGGGGCATTAGTATTTCGTGGTCAG 1034 Query 230 AGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTT 289 ||||||||||||| |||| |||||| || | ||||||||| | | |||| ||| Sbjct 1035 AGGTGAAATTCTTAGATTCTCGAAAGACTTACAAATGCGAAAGCAATTGTCCAGGACGTT 1094 Query 290 TTCATTAATCAG 301 |||| || || Sbjct 1095 CCCATTGATGAG 1106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914460911936