Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq48504 298 1e-78 >seq48504 Length=3620 Score = 298 bits (330), Expect = 1e-78 Identities = 318/419 (76%), Gaps = 23/419 (5%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || | |||||||||| | || ||||||||| ||||||| |||||||||| Sbjct 1170 CGCGGGAACTCCGCATCTTCACGGAGAATTCAATTTCGCTGAGTCGATACTGGAGACAGC 1229 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1230 GGGGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1289 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 |||||||||| || ||||||||||||||| || ||| |||| || ||||||| || Sbjct 1290 TTAGGACCGTCATAGTTACGGCCGCCGTTCACTGGGACTTCAATTCAGAGCTT-GC---- 1344 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||||| | |||| ||||| |||| |||||||||||| ||||||||| || || Sbjct 1345 ----ACCCCTCCTCTTAATCTTCCAGCACTGGGCAGGCGTCAGACCCTATACTTCGTCTA 1400 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 | | ||||||||| ||||||||||||||||||||||| | ||| || | | | ||| Sbjct 1401 TTGACTTTGCAGAGCCCTGTGTTTTTAATAAACAGTCGCTACCCCCTAGTTTGTGCCACC 1460 Query 301 GGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACG 360 || | | || | | | |||| || ||||||||||||||||| Sbjct 1461 --TATAA----ATGG--------TTGCCCATTCACAGGTCATCCTTCTCCCGAAGTTACA 1506 Query 361 GTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 | | |||||||||||||||| | |||||||||||||||| ||||| ||||||| Sbjct 1507 GATGCAATTTGCCTAGTTCCTTCAGCATCGTTCTCTCAAGCGCCTAGGTATACTCTACC 1565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1259781815744