Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq48504 414 4e-113 >seq48504 Length=3620 Score = 414 bits (458), Expect = 4e-113 Identities = 464/606 (77%), Gaps = 21/606 (3%) Strand=Plus/Plus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||||| ||| |||| | ||| ||||| | || ||| | ||| || |||||| Sbjct 2124 TCGACTATGGACCTTAG-CACCCATAGTCTGTCTGCTATGCTGT-ACTCGTCGACATTCG 2181 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGG-CCCCCTAGACCATCCAGTGCTCTACCTCC 119 |||||||||||| || |||||| ||| || |||||||| ||||||||||||||||| | Sbjct 2182 GAGTTTGGTTGAGTTTGGTAAGTCTGTAGGACCCCCTAGCTCATCCAGTGCTCTACCTTC 2241 Query 120 GGGAAGAAACACGCGA---CGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACG 176 | | | | ||| | |||| |||||||| |||||| |||||||||||||| | Sbjct 2242 G--ACGGTAATCGCTATAACGCTCTACCTAAATAGATTTCGCGGAGAACCAGCTATATCC 2299 Query 177 AAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTG 236 ||||||||| |||||||||||||| |||||| ||||||||| |||||||| |||| Sbjct 2300 GAGTTTGATTAGCCTTTCACCCCTAGCCACAGCTCATCCCCTACTTTTTCAACAGTAGTG 2359 Query 237 GGTTCGGTCCTCCACGCGG-TCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTC 295 ||||||||||| || |||| | |||| | |||||||||| |||||| ||||||||| Sbjct 2360 GGTTCGGTCCTTCA-GCGGATATTACTCCACCTTCAACCTGGCCATGGCTAGATCACTCG 2418 Query 296 GCTTCGGGTCTTGATCGTGCCACTCATA-CGCCCTATTCGGACTCGCTTTCGCTACGGCT 354 | ||||||||| || | ||| | | |||||||||| ||||||||||||||||| || Sbjct 2419 GTTTCGGGTCTAATTCATCTAACTAAAATCGCCCTATTCAGACTCGCTTTCGCTACGCCT 2478 Query 355 ACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGC 414 || || |||| |||| || || | | || | || |||| | | |||| | ||||||| Sbjct 2479 ACACCTAACGGCTTAAGCTTGCTAGATAA-ACTAAGTCGCTGACCCATTATACAAAAGGT 2537 Query 415 ACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTT 474 |||||||||| | || |||| | || |||||||| | ||||| ||| ||||| Sbjct 2538 ACGCCGTCAC--AGAACATAAATG-----TCTGCTCCGACTGCTTGTAAGCATTCGGTTT 2590 Query 475 CAGGTACTATTTCACTCCCC-GCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTC 533 ||||| |||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 2591 CAGGT-CTATTTCACTCCCCTTATCGGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTT 2649 Query 534 CGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAA 593 | ||||||||||| | ||||| ||||||||| |||||||||| | | |||| || Sbjct 2650 CACTATCGGTCACTAGAGAGTACTTAGGCTTAGAGGGTGGTCCCCCTATGTTCAAACAGG 2709 Query 594 ATTTCA 599 |||||| Sbjct 2710 ATTTCA 2715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1816132160768