Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq48504 333 7e-89 >seq48504 Length=3620 Score = 333 bits (368), Expect = 7e-89 Identities = 335/418 (80%), Gaps = 18/418 (4%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 |||||| |||| || ||| |||||||||| ||||| ||||||||||| ||| || || Sbjct 2326 CCACAGCTCATCCC-CTA-CTTTTTCAACAGTAGTGGGTTCGGTCCTTCAGCGGATA-TT 2382 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 || | ||||| ||||||| |||| || |||||| | |||||| |||||||| ||| | | Sbjct 2383 ACTCCACCTT-CAACCTGGCCAT-GGCTAGATCACTCGGTTT-CGGGTCTAATTC--ATC 2437 Query 129 GA-CTAGA--CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGC 184 | ||| | ||||||| | ||||||||||| |||||||||| | |||| | |||||| Sbjct 2438 TAACTAAAATCGCCCTATTCAGACTCGCTTT-CGCTACGCCTACACCTAACGGCTTAAGC 2496 Query 185 TTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAA 244 || || | ||| |||||||||||||||||||||||||||||||| ||||| |||| | Sbjct 2497 TT-GCTAGATAAACTAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCACAGAACATA 2555 Query 245 ---GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCC 301 || ||||| |||||||||| |||| |||||||||| |||||||||||||||| | Sbjct 2556 AATGTCTGCTCCGACTGCTTGTAAGCATTCGGTTTCAGG-TCTATTTCACTCCCCTTATC 2614 Query 302 GGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTT 361 |||||||||||| |||||||||||||||||| ||||||||||||||| | |||| || Sbjct 2615 GGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTTCACTATCGGTCACTAGAGAGTACTT 2674 Query 362 AGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 || ||| |||| ||||||||| || |||| ||| |||| |||| ||| | ||||| Sbjct 2675 AGGCTTAGAGGGTGGTCCCCCTATGTTCAAACAGGATTTCACGTGTCCCGCCTTACTC 2732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1240597321088