Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq48504 197 3e-48 >seq48504 Length=3620 Score = 197 bits (218), Expect = 3e-48 Identities = 298/417 (71%), Gaps = 20/417 (5%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||| ||||||| || ||||| |||||||| |||||| | || | ||||| ||||| || Sbjct 1713 CGATTACGCCTTTCAGCCTCACCTTAGGAGCCGACTAAGCCTGCGCAGATTAACTTTACG 1772 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACC--CGTCACACGCTACTCATGCC 118 | |||||||||||| |||||| | ||| ||| | | | ||||||| ||| | Sbjct 1773 CAGGAACCCTTGGACTTTCGGCGAGAATGTTTCTCACATTCTTTAT-CGCTACTTATGTC 1831 Query 119 TGCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACAC 177 ||||||||||| | | ||||| || || |||| || |||||| || || Sbjct 1832 AGCATTCTCACTTCCGATACCTCCAGCAAACT-TCACAGTTCACCTTCACAGGCTTACGG 1890 Query 178 GACGCTCCCCTACCCAACCACACAGGT----TGCCA-----CAGCTTCGGCGGATAACTT 228 ||||||| ||||| | | ||| | ||| | || |||||| || |||| Sbjct 1891 AACGCTCCGCTACC-ATCTGCACTATTAAAGTGCAAATCCGCATCTTCGGTACATGACTT 1949 Query 229 AAGCCCCGCTACATTATCGGCGCGGAATCACTT-----GACCAGTGAGCTATTACGCACT 283 ||||||| |||||| ||||||| | | |||| ||| ||||||||||||||| | Sbjct 1950 GAGCCCCGTTACATTGTCGGCGCAGGAAAACTTATTTAGACTAGTGAGCTATTACGCTTT 2009 Query 284 CTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTT 343 |||| || |||||||||||| |||||||| |||| ||||| | | |||||||||| Sbjct 2010 CTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTTTTGGTTTTCCCACATCCTT 2069 Query 344 TCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 | |||| ||||| | |||||| |||||| || | |||||||| ||||||||||| Sbjct 2070 TAACACTTAGTCATGATTTAGGGACCTTAGATGGCGGTCTGGGCTTTTTCCCTCTCG 2126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176649005568