Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chaoborus_20trivitattus_20[genbank_20GCA_5F001014815.1_202015-05-28] 80,757 sequences; 269,281,158 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq48504 105 5e-21 >seq48504 Length=3620 Score = 105 bits (116), Expect = 5e-21 Identities = 108/139 (78%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||| ||||||| ||||||||||||| || ||||| ||||||||||||| Sbjct 777 TACCTTTTATTCGTTGAGTGATGGCCCTTCCACTCGGGACCACCAGATCACTATGACCGA 836 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| ||||||| |||| |||||| ||| || ||| |||||||||||| | Sbjct 837 CTTTCGTCTCTGCTCGTCTTGTCAGACTCGCAGTCAGGCTAGCTTATGCCATTGCACTCT 896 Query 121 CACTA--CGATTTCCGACC 137 | || ||||||||||| Sbjct 897 -AATAGTTGATTTCCGACC 914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351733501900