Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22]
247,063 sequences; 314,170,746 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq168888 293 2e-74
>seq168888
Length=4095
Score = 293 bits (324), Expect = 2e-74
Identities = 1125/1758 (64%), Gaps = 33/1758 (2%)
Strand=Plus/Minus
Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136
||| || || ||||| || ||||||||||| | ||| || || | ||| |||||||||||
Sbjct 3211 ATCAACTGTAAACTGTATAGCATTAGCAGCTGGCTTTGTTCTCAAATAATACATGCCGGT 3152
Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196
|| || || ||||||||| || || ||||||| |||||| | ||||| || ||
Sbjct 3151 TTTAAGACCCATTTTCCAAGCATAAAAGTGAATCGATGTTAATTTACCGTAATTTGGTTC 3092
Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256
|| ||||| || || || |||||||| || || || | ||| | ||| ||||||||
Sbjct 3091 AGCTACATGAATGTTAAAAGACTGACTTTGGTCAATAAATGCACCCCTATCGGCAGCCAT 3032
Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAAT 65316
| ||| || | || | |||||| || ||||| || || | || || |
Sbjct 3031 TTGAATTGTAGTTTTAACAGACACCTCCCAAACAGTCTTATATAGATCTCTTATTTCTTT 2972
Query 65317 TGGAATCTCCTCAATGTCCTGGACTGAACCACGA-CGTGCAATAATGCGATTACGCATCG 65375
||||| | || || | || | ||| ||| | ||| || || |||| |||
Sbjct 2971 CGGAATAGCTTCTATATTTTGTATTGACCCATTATTGTG-TATTATAAGATTTTTCATGT 2913
Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGA 65435
|| ||||||| | || | | || | | || ||| |||| | |||||||
Sbjct 2912 CTTCATCCCACAAATCTGCTTCAGTTAAATCACGCAATAAATGATGATTTACAACTTGGA 2853
Query 65436 ACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAG 65495
||||||| |||| || | | || || || || |||| |||||||| ||||||
Sbjct 2852 ACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAAGGTTCAAATGATTCAT 2793
Query 65496 TGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555
|||| || |||||||| || || ||||| |||||||| ||||| | || || || ||||
Sbjct 2792 TGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTAATAATAAAGAATTTC 2733
Query 65556 GCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGT 65615
||| || | | | ||| | | || | ||||||||||| | ||| | |
Sbjct 2732 TCAAACCATGCTTAGAAATTCTTTCTTTTAAAGCATCCCAGTTCCAAA--GGTCGGTGGG 2675
Query 65616 CGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGA 65675
| | | |||||| || | ||| | | || ||||| || || |
Sbjct 2674 GGTTTT----GCTCCACATGTCGTATTGTAATATACCTTGACTGGATGGGCTTCCTTCGT 2619
Query 65676 AACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAAT 65735
|| | || || || || | || | ||||||| ||| || | || ||||| | |||
Sbjct 2618 AAGTGTCATAAACCCCATACTTTTCTGCAAGTTCACAACTAGCTTCTAGTGCCCCGTAAT 2559
Query 65736 AAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATAC 65795
||||||| || || || || ||||||||| || |||| || || || | || |
Sbjct 2558 AAATGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGCATCACTTTCATATGCAATGC 2499
Query 65796 CCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCA 65855
||||| |||||| || || || || |||||||| ||||| || || || | ||| | ||
Sbjct 2498 GCATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCTATAGGCCTATGCCTCA 2439
Query 65856 AATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAAT 65915
||| || ||| ||||| || | || ||| |||| | ||| || || ||| || |
Sbjct 2438 TATTTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCAATGATTTTATTTAAGT 2379
Query 65916 TGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGAT 65975
| | || | | | || | |||| | |||| | |||||| ||
Sbjct 2378 TTTGAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAAT-TATATGTTT-----TAT 2325
Query 65976 CGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTA 66035
| | | |||||| || | |||| |||||| | || || || || |
Sbjct 2324 CTTCATT---------AACAAACATGTTCAAAGCAATAGATGCTAAATTACACACCGCGA 2274
Query 66036 TCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGC 66095
||||||| | || || || || || || ||||| | ||||| || ||| ||||
Sbjct 2273 CTTCGTCAGCTGACGTGTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGTGC 2214
Query 66096 CCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGC 66155
| || |||| ||| ||||| || | || || || || ||||| | ||| || || || |
Sbjct 2213 CTAAGTTCTTTTGGTTACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGTGTTC 2154
Query 66156 CGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC-GT---A 66211
| || |||||||||| || || ||||| | ||| | | | | || | ||| || |
Sbjct 2153 CCGTTTCAACTTGGGCTTCGATTATGGCTTTCCATAAAACTTGGGCGCTGACCTGTTTCA 2094
Query 66212 CGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCAT 66271
| | ||| | | || |||||| ||||| || || | |||||| || |||||
Sbjct 2093 CAAAACGCTTTTCTTT----TTCGTATTGTTCATATAGATTTTCGAATTCATCTCCCCAA 2038
Query 66272 ACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCT 66331
|| | | | ||||| | || |||||||| || ||| || ||| | |||
Sbjct 2037 CAGTCAGCTAATCCAGGACAATCATGAGGACACATAAGACTCCAGTCTTCATTTTTTTCA 1978
Query 66332 ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGC 66391
|| | |||||| ||||| |||||||| | || || || | || || ||||||
Sbjct 1977 ACTCTTTTCATAAAAAGATCCGGTATCCATAAAGCATAAAACAACTCTCGAGCTCGTACT 1918
Query 66392 TCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGG 66450
|| || |||| ||| | ||| | | |||||| || ||||| ||||| |||||||| ||
Sbjct 1917 TCTTCTTTGCCAGTGTTCTTTTTG-AGGTCGAGAAATTCAAAAATGTCTGCATGCCAAGG 1859
Query 66451 TTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC 66510
|| | || | || || | || ||||| |||||||| || || || | ||
Sbjct 1858 CTCTAAATACACTGCAAAAGCTCCGGGGCGTTTATTTCCACCTTGATCTACATATCTTGC 1799
Query 66511 GACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTC 66570
|||||| | || | | ||| || ||||| ||||||||| ||||| ||||| |
Sbjct 1798 TGTGTTGTTGTAAACCCTAAGCATTGGCACGAGTCCGTTAGATACACCATTTGTGCCTGC 1739
Query 66571 GATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTT 66630
||| |||||| || | ||| |||||| | | || || ||||| || | ||
Sbjct 1738 GATATATGATCCTTTAGCTCTGATACAGTGAACGTGGACTCCGATTCCACCAGCAGATTT 1679
Query 66631 CGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGAT 66690
|| || ||||| | | || |||| || ||||| |||| | || ||
Sbjct 1678 AGATATAAGCGCACATTGTTTTAAAGTATCATATATACCTTCAATACTGTCATCTTTCAT 1619
Query 66691 GGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGG 66750
| | || | || || | ||| || |||||||| || ||||| ||||| ||
Sbjct 1618 AGCTACAAGAAAACAAGATGACAATTGTGGCCGTGGTGTGGCAGCTGAGAACAGGGTTGG 1559
Query 66751 TGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAAT 66810
| ||||| ||||| || | ||||| ||||||| || | ||| ||||||| ||
Sbjct 1558 GCTGGCGTGTGTAAAATATTTTTCAGACAGCAAATTGTAAGTATTTATGGCAGCATCTAT 1499
Query 66811 GTTTTCGCCATGAATCCC 66828
| ||| ||||| || ||
Sbjct 1498 ATCTTCACCATGGATACC 1481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396370890822320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |