Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq168888 293 2e-74 >seq168888 Length=4095 Score = 293 bits (324), Expect = 2e-74 Identities = 1125/1758 (64%), Gaps = 33/1758 (2%) Strand=Plus/Minus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || || ||||| || ||||||||||| | ||| || || | ||| ||||||||||| Sbjct 3211 ATCAACTGTAAACTGTATAGCATTAGCAGCTGGCTTTGTTCTCAAATAATACATGCCGGT 3152 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 || || || ||||||||| || || ||||||| |||||| | ||||| || || Sbjct 3151 TTTAAGACCCATTTTCCAAGCATAAAAGTGAATCGATGTTAATTTACCGTAATTTGGTTC 3092 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || ||||| || || || |||||||| || || || | ||| | ||| |||||||| Sbjct 3091 AGCTACATGAATGTTAAAAGACTGACTTTGGTCAATAAATGCACCCCTATCGGCAGCCAT 3032 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAAT 65316 | ||| || | || | |||||| || ||||| || || | || || | Sbjct 3031 TTGAATTGTAGTTTTAACAGACACCTCCCAAACAGTCTTATATAGATCTCTTATTTCTTT 2972 Query 65317 TGGAATCTCCTCAATGTCCTGGACTGAACCACGA-CGTGCAATAATGCGATTACGCATCG 65375 ||||| | || || | || | ||| ||| | ||| || || |||| ||| Sbjct 2971 CGGAATAGCTTCTATATTTTGTATTGACCCATTATTGTG-TATTATAAGATTTTTCATGT 2913 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGA 65435 || ||||||| | || | | || | | || ||| |||| | ||||||| Sbjct 2912 CTTCATCCCACAAATCTGCTTCAGTTAAATCACGCAATAAATGATGATTTACAACTTGGA 2853 Query 65436 ACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAG 65495 ||||||| |||| || | | || || || || |||| |||||||| |||||| Sbjct 2852 ACTCGCCAGACAAAACTCTTCTTTGGTATATATTTGATGTGAAAGGTTCAAATGATTCAT 2793 Query 65496 TGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555 |||| || |||||||| || || ||||| |||||||| ||||| | || || || |||| Sbjct 2792 TGTTACCAAGAATTTGAGCCGTGGATGCTGTTGGCATAGGAGCTAATAATAAAGAATTTC 2733 Query 65556 GCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCGT 65615 ||| || | | | ||| | | || | ||||||||||| | ||| | | Sbjct 2732 TCAAACCATGCTTAGAAATTCTTTCTTTTAAAGCATCCCAGTTCCAAA--GGTCGGTGGG 2675 Query 65616 CGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGGA 65675 | | | |||||| || | ||| | | || ||||| || || | Sbjct 2674 GGTTTT----GCTCCACATGTCGTATTGTAATATACCTTGACTGGATGGGCTTCCTTCGT 2619 Query 65676 AACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAAT 65735 || | || || || || | || | ||||||| ||| || | || ||||| | ||| Sbjct 2618 AAGTGTCATAAACCCCATACTTTTCTGCAAGTTCACAACTAGCTTCTAGTGCCCCGTAAT 2559 Query 65736 AAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATAC 65795 ||||||| || || || || ||||||||| || |||| || || || | || | Sbjct 2558 AAATGGTTTCAAATATTTGTTGATTAAGTTTCATCGCTGCATCACTTTCATATGCAATGC 2499 Query 65796 CCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCA 65855 ||||| |||||| || || || || |||||||| ||||| || || || | ||| | || Sbjct 2498 GCATCAAGACAAATGTATCTGCTAGCCCTTGAACACCAATTCCTATAGGCCTATGCCTCA 2439 Query 65856 AATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAAT 65915 ||| || ||| ||||| || | || ||| |||| | ||| || || ||| || | Sbjct 2438 TATTTGATTTTCTTGCCTCCGGGATCGGATAGAAATTAACATCAATGATTTTATTTAAGT 2379 Query 65916 TGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGAT 65975 | | || | | | || | |||| | |||| | |||||| || Sbjct 2378 TTTGAGTAATAATTTTGGTGACTTCTTTTAATTTATTAAAAT-TATATGTTT-----TAT 2325 Query 65976 CGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTA 66035 | | | |||||| || | |||| |||||| | || || || || | Sbjct 2324 CTTCATT---------AACAAACATGTTCAAAGCAATAGATGCTAAATTACACACCGCGA 2274 Query 66036 TCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGC 66095 ||||||| | || || || || || || ||||| | ||||| || ||| |||| Sbjct 2273 CTTCGTCAGCTGACGTGTATTCAACGATCTCAGTGCATAAGTTACTACATTTTATAGTGC 2214 Query 66096 CCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGC 66155 | || |||| ||| ||||| || | || || || || ||||| | ||| || || || | Sbjct 2213 CTAAGTTCTTTTGGTTACTTTTCCTGTTACAAGCGTCTTTGTAAAGCATATAGGGTGTTC 2154 Query 66156 CGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC-GT---A 66211 | || |||||||||| || || ||||| | ||| | | | | || | ||| || | Sbjct 2153 CCGTTTCAACTTGGGCTTCGATTATGGCTTTCCATAAAACTTGGGCGCTGACCTGTTTCA 2094 Query 66212 CGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCAT 66271 | | ||| | | || |||||| ||||| || || | |||||| || ||||| Sbjct 2093 CAAAACGCTTTTCTTT----TTCGTATTGTTCATATAGATTTTCGAATTCATCTCCCCAA 2038 Query 66272 ACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCT 66331 || | | | ||||| | || |||||||| || ||| || ||| | ||| Sbjct 2037 CAGTCAGCTAATCCAGGACAATCATGAGGACACATAAGACTCCAGTCTTCATTTTTTTCA 1978 Query 66332 ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGC 66391 || | |||||| ||||| |||||||| | || || || | || || |||||| Sbjct 1977 ACTCTTTTCATAAAAAGATCCGGTATCCATAAAGCATAAAACAACTCTCGAGCTCGTACT 1918 Query 66392 TCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGG 66450 || || |||| ||| | ||| | | |||||| || ||||| ||||| |||||||| || Sbjct 1917 TCTTCTTTGCCAGTGTTCTTTTTG-AGGTCGAGAAATTCAAAAATGTCTGCATGCCAAGG 1859 Query 66451 TTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC 66510 || | || | || || | || ||||| |||||||| || || || | || Sbjct 1858 CTCTAAATACACTGCAAAAGCTCCGGGGCGTTTATTTCCACCTTGATCTACATATCTTGC 1799 Query 66511 GACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTC 66570 |||||| | || | | ||| || ||||| ||||||||| ||||| ||||| | Sbjct 1798 TGTGTTGTTGTAAACCCTAAGCATTGGCACGAGTCCGTTAGATACACCATTTGTGCCTGC 1739 Query 66571 GATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTT 66630 ||| |||||| || | ||| |||||| | | || || ||||| || | || Sbjct 1738 GATATATGATCCTTTAGCTCTGATACAGTGAACGTGGACTCCGATTCCACCAGCAGATTT 1679 Query 66631 CGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGAT 66690 || || ||||| | | || |||| || ||||| |||| | || || Sbjct 1678 AGATATAAGCGCACATTGTTTTAAAGTATCATATATACCTTCAATACTGTCATCTTTCAT 1619 Query 66691 GGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGG 66750 | | || | || || | ||| || |||||||| || ||||| ||||| || Sbjct 1618 AGCTACAAGAAAACAAGATGACAATTGTGGCCGTGGTGTGGCAGCTGAGAACAGGGTTGG 1559 Query 66751 TGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAAT 66810 | ||||| ||||| || | ||||| ||||||| || | ||| ||||||| || Sbjct 1558 GCTGGCGTGTGTAAAATATTTTTCAGACAGCAAATTGTAAGTATTTATGGCAGCATCTAT 1499 Query 66811 GTTTTCGCCATGAATCCC 66828 | ||| ||||| || || Sbjct 1498 ATCTTCACCATGGATACC 1481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396370890822320