Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_033070.1 Length=11145 Score E Sequences producing significant alignments: (Bits) Value seq103783 105 5e-19 >seq103783 Length=304 Score = 105 bits (116), Expect = 5e-19 Identities = 197/288 (68%), Gaps = 1/288 (0%) Strand=Plus/Plus Query 6286 AGAGATTATTTTGTGATGACAGAGTATCTTATCAAAACACACTTTGTACCTCTGTTCAAA 6345 ||||| |||||||| | || || ||||| || ||||| || ||||| || | ||| | Sbjct 17 AGAGAATATTTTGTTGTCACTGAATATCTAATTAAAACGCATTTTGTCCCATTATTCCAC 76 Query 6346 GGTCTGACAATGGCAGACGATTTGACAACTGTAATCGGAAAAATTTTAGAGAATACAGAG 6405 || |||||||||| || ||||||| ||||| ||| || || | || || ||| Sbjct 77 GGCTTGACAATGGCCGATGATTTGAACACTGTTATCAAGAAGATGATGGATAACACATCT 136 Query 6406 GGACAAGGAGAAACAGGGTATGAGAATATCACGGTTTCAAACCATATAGATTACGAGAAA 6465 ||||||||| | | ||||| ||||| || | || ||| | |||||| ||| Sbjct 137 GGACAAGGAAATGATGATTATGAAAATATATGTATTGCCAATCATGTTGATTACACTAAA 196 Query 6466 TGGAACAACCACCAAAGGAAAGAGGCCAATAATCCTGTGTTTGATGTAATGGGGAAATTC 6525 |||||||| || ||| | | || || ||||| || || || | || |||| ||||| Sbjct 197 TGGAACAATCATCAACAGGATGAAGCTAATAAACCCGTTTTCCAAGTTATGGATAAATTT 256 Query 6526 CTTGGCTACCCCAACCTTATCTCACGTACCCATGAAAT-ATTCGAAAA 6572 | || | |||| | || || | || |||||| | |||| |||| Sbjct 257 TTAGGTTTTAACAACTTGATATCGAGAACTCATGAATTCATTCCAAAA 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35449993576788