Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chilo_20suppressalis_20[genbank_20GCA_5F000636095.1_202014-04-22] 247,063 sequences; 314,170,746 total letters Query= NC_033731.1 Length=12548 Score E Sequences producing significant alignments: (Bits) Value seq103783 111 1e-20 >seq103783 Length=304 Score = 111 bits (122), Expect = 1e-20 Identities = 181/261 (69%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 6289 AATGTCTTGGGAGTTGAGAGAGTATTTTGTTATAACTGAGTGGCTCATAAAGAAGTATTT 6348 |||||| ||| ||||||||| ||||||||| | ||||| | || || || | | |||| Sbjct 1 AATGTCATGGAGGTTGAGAGAATATTTTGTTGTCACTGAATATCTAATTAAAACGCATTT 60 Query 6349 CGTTCCGTTACTAAGAGACTTAACAATGGCAGACGACTTGAATGATGTCATAAGTAAAAT 6408 || || ||| | | ||| |||||||| || || ||||| ||| || | || || Sbjct 61 TGTCCCATTATTCCACGGCTTGACAATGGCCGATGATTTGAACACTGTTATCAAGAAGAT 120 Query 6409 GTTGTCTAGTACATCAGGACAAGGGTTGGATGACTACTCAGTAGTATCTATTTCTAACCA 6468 | || || ||||| |||||||| ||||| || | ||| |||| | || || Sbjct 121 GATGGATAACACATCTGGACAAGGAAATGATGATTATGAAAATATATGTATTGCCAATCA 180 Query 6469 CTTAGATTACGAGAAATGGAACAATCACCAAAGGAAGGAATCAAATGATCCTGTATTCAG 6528 | |||||| |||||||||||||| ||| | | ||| | ||| | || || ||| Sbjct 181 TGTTGATTACACTAAATGGAACAATCATCAACAGGATGAAGCTAATAAACCCGTTTTCCA 240 Query 6529 AGTGATGGGTCAATTTTTGGG 6549 ||| |||| | ||||||| || Sbjct 241 AGTTATGGATAAATTTTTAGG 261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39927114918784